RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 TCHHQ07283 1943 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 WNT9AO14904 365 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 FAM155BO75949 473 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 PFKLP17858 780 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 SLC6A4P31645 630 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 ZNF132P52740 706 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 EPHA7Q15375 998 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 KIAA0895LQ68EN5 471 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 RBM44Q6ZP01 1051 aaKnown RBP11.88□□□□□ -0.51
RTN4-211ENST00000438462 TPH2Q8IWU9 490 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 DEPTORQ8TB45 409 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 IFI44Q8TCB0 444 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 TBCKQ8TEA7 893 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 OTUB2Q96DC9 234 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 ABHD17AQ96GS6 310 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 ERVMER34-1Q9H9K5 563 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 EBF2Q9HAK2 575 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 ENTPD4Q9Y227 616 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 TNFSF13BQ9Y275 285 aa11.88□□□□□ -0.51
RTN4-211ENST00000438462 SHANK1Q9Y566 2161 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 NEDD8-MDP1E9PL57 170 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 CACNG3O60359 315 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 OLFM2O95897 454 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 HARSP12081 509 aaKnown RBP11.87□□□□□ -0.51
RTN4-211ENST00000438462 NR1D1P20393 614 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 GNA11P29992 359 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 RARRES1P49788 294 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 GUCY2FP51841 1108 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 PDX1P52945 283 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 PFKFB3Q16875 520 aaPredicted RBP11.87□□□□□ -0.51
RTN4-211ENST00000438462 NCAPH2Q6IBW4 605 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 DDX42Q86XP3 938 aaKnown RBP eCLIP11.87□□□□□ -0.519e-7■■□□□ 12.1
RTN4-211ENST00000438462 SPATS2Q86XZ4 545 aaKnown RBP11.87□□□□□ -0.51
RTN4-211ENST00000438462 BBS7Q8IWZ6 715 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 TMTC2Q8N394 836 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 SLC25A45Q8N413 288 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 CPT1CQ8TCG5 803 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 RBM28Q9NW13 759 aaKnown RBP11.87□□□□□ -0.51
RTN4-211ENST00000438462 SCN8AQ9UQD0 1980 aa11.87□□□□□ -0.51
RTN4-211ENST00000438462 PTPRJQ12913 1337 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 FBN1P35555 2871 aaKnown RBP11.86□□□□□ -0.51
RTN4-211ENST00000438462 CYP3A7-CYP3A51PA0A087WV96 503 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 LY6G6EA0A0G2JKS1 128 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 FAM47DPA6NHR8 397 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 TLR4O00206 839 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 SLC37A4O43826 429 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 CYP11A1P05108 521 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 CYP3A7P24462 503 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 PRKCHP24723 683 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 CYP2F1P24903 491 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 DGKGP49619 791 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 LILRA4P59901 499 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 MRPL49Q13405 166 aaKnown RBP11.86□□□□□ -0.51
RTN4-211ENST00000438462 ENPP2Q13822 863 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 SLC10A6Q3KNW5 377 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 DCP1BQ8IZD4 617 aaKnown RBP11.86□□□□□ -0.51
RTN4-211ENST00000438462 TEX19Q8NA77 164 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 PRR7Q8TB68 274 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 CCDC12Q8WUD4 166 aaPredicted RBP11.86□□□□□ -0.51
RTN4-211ENST00000438462 APOLD1Q96LR9 279 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 XPO6Q96QU8 1125 aaKnown RBP11.86□□□□□ -0.51
RTN4-211ENST00000438462 ZSWIM6Q9HCJ5 1215 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 ANKEF1Q9NU02 776 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
RTN4-211ENST00000438462 TP53TG5Q9Y2B4 290 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 U3KQA8 63 aa11.86□□□□□ -0.51
RTN4-211ENST00000438462 RP1L1Q8IWN7 2480 aaPredicted RBP11.86□□□□□ -0.51
RTN4-211ENST00000438462 DOCK9Q9BZ29 2069 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 PLD2O14939 933 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 MBL2P11226 248 aaPredicted RBP11.85□□□□□ -0.51
RTN4-211ENST00000438462 TYRP14679 529 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 LIFRP42702 1097 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 NAMPTP43490 491 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 CDH8P55286 799 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 SEZ6Q53EL9 994 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 CRTC1Q6UUV9 634 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 ADGRF2Q8IZF7 708 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 THEM5Q8N1Q8 247 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 MTA3Q9BTC8 594 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 SGK2Q9HBY8 427 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 PRDM8Q9NQV8 689 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 UCKL1Q9NWZ5 548 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 THAP10Q9P2Z0 257 aaPredicted RBP11.85□□□□□ -0.51
RTN4-211ENST00000438462 LRWD1Q9UFC0 647 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 DDX25Q9UHL0 483 aaKnown RBP11.85□□□□□ -0.51
RTN4-211ENST00000438462 CROCCQ5TZA2 2017 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 NBEAL1Q6ZS30 2694 aa11.85□□□□□ -0.51
RTN4-211ENST00000438462 ARHGEF17Q96PE2 2063 aaPredicted RBP11.84□□□□□ -0.51
RTN4-211ENST00000438462 TTLL8A6PVC2 850 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 OAS1P00973 400 aaKnown RBP11.84□□□□□ -0.51
RTN4-211ENST00000438462 C4BPAP04003 597 aaKnown RBP11.84□□□□□ -0.51
RTN4-211ENST00000438462 EPHX1P07099 455 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 UGT1A5P35504 534 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 RTN1Q16799 776 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 METTL23Q86XA0 190 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 ZFAND4Q86XD8 727 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 ZNF276Q8N554 614 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 OR2T3Q8NH03 318 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 BICD2Q8TD16 824 aa11.84□□□□□ -0.51
RTN4-211ENST00000438462 P2RY11Q96G91 374 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms