RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ELP3Q9H9T3 547 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 EFCAB1Q9HAE3 211 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 NFASCO94856 1347 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 A0A087WZ62 844 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 MEI4A8MW99 385 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 SNUPNO95149 360 aaKnown RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 ASMTLO95671 621 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 MOCS2O96007 188 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 CYP1A1P04798 512 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 ADSSP30520 456 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 ZNF143P52747 638 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 TMEM62Q0P6H9 643 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 C15orf59Q2T9L4 293 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 ZNF484Q5JVG2 852 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 GLRA4Q5JXX5 417 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 SEL1L3Q68CR1 1132 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 BNC2Q6ZN30 1099 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 KDELC2Q7Z4H8 507 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 LCA5Q86VQ0 697 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 PIWIL2Q8TC59 973 aaKnown RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 BORCS6Q96GS4 357 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 ELMO2Q96JJ3 720 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 RNF157Q96PX1 679 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 FDXACB1Q9BRP7 624 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 ETNK2Q9NVF9 386 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 ARHGEF38Q9NXL2 777 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 COL20A1Q9P218 1284 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 ARHGAP28Q9P2N2 729 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 SORCS3Q9UPU3 1222 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 AURKCQ9UQB9 309 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 MYH15Q9Y2K3 1946 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 WDR27A2RRH5 827 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 GSTA4O15217 222 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 H2AFYO75367 372 aaKnown RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TOMM70O94826 608 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TRUB2O95900 331 aaKnown RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 RARBP10826 455 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 CA8P35219 290 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TNFSF9P41273 254 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 HSPA13P48723 471 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 NR2C2P49116 596 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 WDR4P57081 412 aaKnown RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 STX5Q13190 355 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 MPP3Q13368 585 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 LAMC2Q13753 1193 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 CAPSQ13938 189 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 RNASEH2BQ5TBB1 312 aaKnown RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 FASTKD5Q7L8L6 764 aaKnown RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 ANKS1BQ7Z6G8 1248 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 SCN4BQ8IWT1 228 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 HTR3CQ8WXA8 447 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 SGF29Q96ES7 293 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TRIM62Q9BVG3 475 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 ING2Q9H160 280 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TSPYL2Q9H2G4 693 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 ARL8BQ9NVJ2 186 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 UBQLN1Q9UMX0 589 aaKnown RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 CHKBQ9Y259 395 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 C4AP0C0L4 1744 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 C4BP0C0L5 1744 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TIAM2Q8IVF5 1701 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 LACTBL1A8MY62 500 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 LIN7AO14910 233 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 GSC2O15499 205 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 AKAP10O43572 662 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 PDE5AO76074 875 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 ZBTB7AO95365 584 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 PROCP04070 461 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 CDKN2BP42772 138 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TAF6P49848 677 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 MMRN1Q13201 1228 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 GRM1Q13255 1194 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 PDCD2Q16342 344 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 DCAF4L1Q3SXM0 396 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 SV2CQ496J9 727 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 C16orf46Q6P387 395 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 SCUBE3Q8IX30 993 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 DDIASQ8IXT1 998 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 THEM5Q8N1Q8 247 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 LRRC43Q8N309 656 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 ATPAF2Q8N5M1 289 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 PCYOX1LQ8NBM8 494 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 RFWD2Q8NHY2 731 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 JOSD2Q8TAC2 188 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 CPT1BQ92523 772 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 CPB2Q96IY4 423 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TCF7L2Q9NQB0 619 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 ITGA11Q9UKX5 1188 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 ORC6Q9Y5N6 252 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TRPC5OSA6NMA1 111 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 ANGPT2O15123 496 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 DNAJC6O75061 913 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 AMPD1P23109 780 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 MGAT1P26572 445 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 PNPLA4P41247 253 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 GSCP56915 257 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TSPY1Q01534 308 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 IL1RL1Q01638 556 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 POU5F1Q01860 360 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms