RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 GOLGA6DP0CG33 693 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 NCAM1P13591 858 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 ATF2P15336 505 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 L1CAMP32004 1257 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 ANKRD20A8PQ5CZ79 823 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 FAM182AQ5T1J6 154 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 STKLD1Q8NE28 680 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 PCDH19Q8TAB3 1148 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 FAM76AQ8TAV0 307 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 UBLCP1Q8WVY7 318 aaPredicted RBP21.98■■□□□ 1.11
PTPRF-207ENST00000436724 LRRC45Q96CN5 670 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 PIGVQ9NUD9 493 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 TMEM39AQ9NV64 488 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 MTMR10Q9NXD2 777 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 GOLGA6AQ9NYA3 693 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 ABI2Q9NYB9 513 aaPredicted RBP21.98■■□□□ 1.11
PTPRF-207ENST00000436724 SGK1O00141 431 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 MAP3K6O95382 1288 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 LTFP02788 710 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 ITGA8P53708 1063 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 GDF10P55107 478 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 PQLC3Q8N755 202 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 SLC7A14Q8TBB6 771 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 PAWRQ96IZ0 340 aaKnown RBP21.98■■□□□ 1.11
PTPRF-207ENST00000436724 PGLYRP2Q96PD5 576 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 NCAPGQ9BPX3 1015 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 TXLNGYQ9BZA5 131 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 ZCWPW1Q9H0M4 648 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 WHRNQ9P202 907 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 DRG1Q9Y295 367 aaKnown RBP21.98■■□□□ 1.11
PTPRF-207ENST00000436724 MICAL3Q7RTP6 2002 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 FNDC1Q4ZHG4 1894 aaPredicted RBP21.97■■□□□ 1.11
PTPRF-207ENST00000436724 GOLGA8KD6RF30 607 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 OPA1O60313 960 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 IFNB1P01574 187 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 ITGAVP06756 1048 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 GRIK1P39086 918 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 LMNB2Q03252 620 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 DPYSL2Q16555 572 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 C1orf228Q6PIY5 440 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 FBXO46Q6PJ61 603 aaPredicted RBP21.97■■□□□ 1.11
PTPRF-207ENST00000436724 BNIPLQ7Z465 357 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 CCDC89Q8N998 374 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 TTC13Q8NBP0 860 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.97■■□□□ 1.11
PTPRF-207ENST00000436724 ARL8AQ96BM9 186 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 KCTD15Q96SI1 283 aaPredicted RBP21.97■■□□□ 1.11
PTPRF-207ENST00000436724 STAP1Q9ULZ2 295 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 SHOX2O60902 331 aaPredicted RBP21.97■■□□□ 1.11
PTPRF-207ENST00000436724 PPFIA2O75334 1257 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 GBP1P32455 592 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 UBAP2Q5T6F2 1119 aaKnown RBP21.97■■□□□ 1.11
PTPRF-207ENST00000436724 C1orf53Q5VUE5 145 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 C4orf50Q6ZRC1 276 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 ZC3H18Q86VM9 953 aaKnown RBP21.97■■□□□ 1.11
PTPRF-207ENST00000436724 PLD5Q8N7P1 536 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 OR2W6PQ8NHA6 318 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 PLAAQ9Y263 795 aa21.97■■□□□ 1.11
PTPRF-207ENST00000436724 SYN3O14994 580 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 GALTP07902 379 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 ITIH2P19823 946 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 NRLP54845 237 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 EIF3EP60228 445 aaKnown RBP21.96■■□□□ 1.11
PTPRF-207ENST00000436724 DEUP1Q05D60 604 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 LRRC26Q2I0M4 334 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 P3H1Q32P28 736 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 CTXN3Q4LDR2 81 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 SDHAF4Q5VUM1 108 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 TMCO2Q7Z6W1 182 aaPredicted RBP21.96■■□□□ 1.11
PTPRF-207ENST00000436724 SCN4BQ8IWT1 228 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 BCL7CQ8WUZ0 217 aaPredicted RBP21.96■■□□□ 1.11
PTPRF-207ENST00000436724 PWWP2AQ96N64 755 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 MTRF1LQ9UGC7 380 aaKnown RBP21.96■■□□□ 1.11
PTPRF-207ENST00000436724 FZD10Q9ULW2 581 aa21.96■■□□□ 1.11
PTPRF-207ENST00000436724 HOXA2O43364 376 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 ITGB8P26012 769 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 RDXP35241 583 aaKnown RBP21.95■■□□□ 1.1
PTPRF-207ENST00000436724 SLC5A3P53794 718 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 TFDP2Q14188 446 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 TTMPQ5BVD1 217 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 PM20D1Q6GTS8 502 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 RHBDF2Q6PJF5 856 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 CCDC25Q86WR0 208 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 LRRN4Q8WUT4 740 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 P3H4Q92791 437 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 ZNF670Q9BS34 389 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 COLEC11Q9BWP8 271 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 HEY1Q9Y5J3 304 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 AMHP03971 560 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 RBP3P10745 1247 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 CHKAP35790 457 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 GJA8P48165 433 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 GPR15P49685 360 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 ARPP19P56211 112 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 BSPRYQ5W0U4 402 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 FUT10Q6P4F1 479 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 TAS1R1Q7RTX1 841 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 UNC45BQ8IWX7 931 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 TTC9BQ8N6N2 239 aa21.95■■□□□ 1.1
PTPRF-207ENST00000436724 RUFY1Q96T51 708 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms