RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 DUSP16Q9BY84 665 aa9.37□□□□□ -0.91
CTDSPL-205ENST00000436654 DNAI2Q9GZS0 605 aa9.37□□□□□ -0.91
CTDSPL-205ENST00000436654 PNPLA8Q9NP80 782 aa9.37□□□□□ -0.91
CTDSPL-205ENST00000436654 RAB20Q9NX57 234 aa9.37□□□□□ -0.91
CTDSPL-205ENST00000436654 PLK2Q9NYY3 685 aa9.37□□□□□ -0.91
CTDSPL-205ENST00000436654 MBD1Q9UIS9 605 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL-205ENST00000436654 DNMT3LQ9UJW3 386 aa9.37□□□□□ -0.91
CTDSPL-205ENST00000436654 ATXN2Q99700 1313 aaKnown RBP9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 PRRT4C9JH25 899 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 KHNYNO15037 678 aaKnown RBP9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 CETN3O15182 167 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 CACNG3O60359 315 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 KCNK5O95279 499 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 EPB41P11171 864 aaKnown RBP9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 HOXB2P14652 356 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 GABRG2P18507 467 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 NTSR1P30989 418 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 GTF2H1P32780 548 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 PRCPP42785 496 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 PTGER3P43115 390 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 PLA2G4AP47712 749 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 RAD23BP54727 409 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 ENPEPQ07075 957 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 EFEMP1Q12805 493 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 EDRF1Q3B7T1 1238 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 MAP7D1Q3KQU3 841 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 PREPLQ4J6C6 727 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 DCAF17Q5H9S7 520 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 PSAPL1Q6NUJ1 521 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 NUDT18Q6ZVK8 323 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 LPCAT2Q7L5N7 544 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 CCDC186Q7Z3E2 898 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 TRMT11Q7Z4G4 463 aaKnown RBP9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 CHPFQ8IZ52 775 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 FMR1NBQ8N0W7 255 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 SLC4A11Q8NBS3 891 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 TMEM176AQ96HP8 235 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 XPO6Q96QU8 1125 aaKnown RBP9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 LSM14BQ9BX40 385 aaKnown RBP9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 CISHQ9NSE2 258 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 CALCOCO1Q9P1Z2 691 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 WDR35Q9P2L0 1181 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 RASAL2Q9UJF2 1139 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 FAM208BQ5VWN6 2430 aa9.36□□□□□ -0.91
CTDSPL-205ENST00000436654 A0A1W2PQF6 199 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 GOLGA6L4A6NEF3 574 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 GIPC1O14908 333 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 STX10O60499 249 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 STC2O76061 302 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 KLKB1P03952 638 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 RALAP11233 206 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 DGKGP49619 791 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 PMS1P54277 932 aaKnown RBP9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 IRX4P78413 519 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 BYSLQ13895 437 aaKnown RBP9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 GOLGA7BQ2TAP0 167 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 UAP1L1Q3KQV9 507 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 CBWD6Q4V339 395 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 TRIM61Q5EBN2 209 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 CBWD3Q5JTY5 395 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 CBWD5Q5RIA9 395 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 DAB2IPQ5VWQ8 1189 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 SDE2Q6IQ49 451 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 KIAA1211LQ6NV74 962 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 KLHDC10Q6PID8 442 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 Q6ZNB5 142 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 TADA2BQ86TJ2 420 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 PIGZQ86VD9 579 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 NDRG1Q92597 394 aaKnown RBP9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 P2RY11Q96G91 374 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 CCDC34Q96HJ3 373 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 TSG101Q99816 390 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 SLC6A17Q9H1V8 727 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 TMEM9BQ9NQ34 198 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 TMEM74BQ9NUR3 256 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 RMND1Q9NWS8 449 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 CACNA2D2Q9NY47 1150 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 MARK1Q9P0L2 795 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 ANGPTL2Q9UKU9 493 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 RAD54BQ9Y620 910 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 USP3Q9Y6I4 520 aa9.35□□□□□ -0.91
CTDSPL-205ENST00000436654 SLC12A8A0AV02 714 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 TRIM49BA6NDI0 452 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 WASH3PC4AMC7 463 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 TULP2O00295 520 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 CDX4O14627 284 aaPredicted RBP9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 SLC16A3O15427 465 aaKnown RBP9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 ZBTB24O43167 697 aaPredicted RBP9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 CISD3P0C7P0 127 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 CD19P15391 556 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 NDUFV2P19404 249 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 ITPKAP23677 461 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 PMLP29590 882 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 CORO1AP31146 461 aaKnown RBP9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 MAPK8P45983 427 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 PSEN1P49768 467 aa9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 NOVA1P51513 510 aaKnown RBP9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 YWHAGP61981 247 aaKnown RBP eCLIP9.34□□□□□ -0.91
CTDSPL-205ENST00000436654 RPL6Q02878 288 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms