RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 RAB41Q5JT25 222 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 C10orf76Q5T2E6 689 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 PPP1R26Q5T8A7 1209 aaPredicted RBP6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 EGFLAMQ63HQ2 1017 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 CEP135Q66GS9 1140 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 KIAA1211LQ6NV74 962 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 SLC23A3Q6PIS1 610 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 TOGARAM2Q6ZUX3 1019 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 CCDC186Q7Z3E2 898 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 CYP2U1Q7Z449 544 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 FAM186BQ8IYM0 893 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 ZNF513Q8N8E2 541 aaPredicted RBP6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 RBBP8NLQ8NC74 664 aaPredicted RBP6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 SPRYD3Q8NCJ5 442 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 HMGB4Q8WW32 186 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 SPATA32Q96LK8 384 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 GABRG3Q99928 467 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 NT5C1AQ9BXI3 368 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 DUSP16Q9BY84 665 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 TMEM8AQ9HCN3 771 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 POLMQ9NP87 494 aaPredicted RBP6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 CLIC5Q9NZA1 410 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 PILRBQ9UKJ0 227 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 NUDT5Q9UKK9 219 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 ANGPTL2Q9UKU9 493 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 MAPK8IP1Q9UQF2 711 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 FRMD4BQ9Y2L6 1034 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 COQ4Q9Y3A0 265 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 PCDHA5Q9Y5H7 936 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 FREM2Q5SZK8 3169 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 IGF2RP11717 2491 aa6.51□□□□□ -1.37
PNKDP1-201ENST00000435914 MUC22E2RYF6 1773 aaPredicted RBP6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 IGHV1OR15-9A0A0B4J2B8 117 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 TCRBV21S2A2A0A5A6 115 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 GFRA2O00451 464 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 KHNYNO15037 678 aaKnown RBP6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 ZNF202O95125 648 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 KIF20AO95235 890 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 IRF1P10914 325 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 RARGP13631 454 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 HOXB2P14652 356 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 NDUFV2P19404 249 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 ITPKAP23677 461 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 GTF2H1P32780 548 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 HOXD12P35452 270 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 PSMC2P35998 433 aaKnown RBP6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 PLA2G4AP47712 749 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 DHPSP49366 369 aaPredicted RBP6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 PSEN1P49768 467 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 RAD23BP54727 409 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 ADAM9Q13443 819 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 ST3GAL2Q16842 350 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 ANO4Q32M45 955 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 COBLL1Q53SF7 1204 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 TRIM61Q5EBN2 209 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 FYB2Q5VWT5 728 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 BTBD8Q5XKL5 378 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 ARHGAP17Q68EM7 881 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 KRT39Q6A163 491 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 GRAMD4Q6IC98 578 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 PSAPL1Q6NUJ1 521 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 LPCAT2Q7L5N7 544 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 TRMT11Q7Z4G4 463 aaKnown RBP6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 PIP4P1Q86T03 277 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 TTC30AQ86WT1 665 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 SYT12Q8IV01 421 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 SLC41A1Q8IVJ1 513 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 FAM217AQ8IXS0 508 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 SMYD4Q8IYR2 804 aaPredicted RBP6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 TMEFF1Q8IYR6 380 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 UBR7Q8N806 425 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 SLC4A11Q8NBS3 891 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 SPATA20Q8TB22 786 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 IPO4Q8TEX9 1081 aaKnown RBP6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 PIGKQ92643 395 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 TATDN2Q93075 761 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 ARID3AQ99856 593 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 BBS2Q9BXC9 721 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 UBXN6Q9BZV1 441 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 FAM124BQ9H5Z6 455 aaPredicted RBP6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 CAPN10Q9HC96 672 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 CD93Q9NPY3 652 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 TMEM9BQ9NQ34 198 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 DNAJC17Q9NVM6 304 aaKnown RBP6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 CALCOCO1Q9P1Z2 691 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 WDR35Q9P2L0 1181 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 DNMT3LQ9UJW3 386 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 SLC27A6Q9Y2P4 619 aa6.5□□□□□ -1.37
PNKDP1-201ENST00000435914 UPK3BL1B0FP48 263 aa6.49□□□□□ -1.37
PNKDP1-201ENST00000435914 WASH3PC4AMC7 463 aa6.49□□□□□ -1.37
PNKDP1-201ENST00000435914 UPK3BL2E5RIL1 263 aa6.49□□□□□ -1.37
PNKDP1-201ENST00000435914 NEDD8-MDP1E9PL57 170 aa6.49□□□□□ -1.37
PNKDP1-201ENST00000435914 TULP2O00295 520 aa6.49□□□□□ -1.37
PNKDP1-201ENST00000435914 GJB3O75712 270 aa6.49□□□□□ -1.37
PNKDP1-201ENST00000435914 GABBR2O75899 941 aa6.49□□□□□ -1.37
PNKDP1-201ENST00000435914 TOP3BO95985 862 aaKnown RBP6.49□□□□□ -1.37
PNKDP1-201ENST00000435914 HSP90AA1P07900 732 aaKnown RBP6.49□□□□□ -1.37
PNKDP1-201ENST00000435914 CEACAM1P13688 526 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms