RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 NOL4O94818 638 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 CR2P20023 1033 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 GARTP22102 1010 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 CSNK1EP49674 416 aaKnown RBP11.08□□□□□ -0.64
CPNE1-214ENST00000435747 AFF3P51826 1226 aaKnown RBP11.08□□□□□ -0.64
CPNE1-214ENST00000435747 ALCAMQ13740 583 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 POSTNQ15063 836 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 STK38Q15208 465 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 C10orf76Q5T2E6 689 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 KIAA1614Q5VZ46 1190 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 FBXL19Q6PCT2 694 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 RHBDF2Q6PJF5 856 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 LRRTM3Q86VH5 581 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 METTL23Q86XA0 190 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 NT5DC4Q86YG4 428 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 DHX40Q8IX18 779 aaKnown RBP11.08□□□□□ -0.64
CPNE1-214ENST00000435747 CHPFQ8IZ52 775 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 DCP1BQ8IZD4 617 aaKnown RBP11.08□□□□□ -0.64
CPNE1-214ENST00000435747 PHTF2Q8N3S3 785 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 SNRNP27Q8WVK2 155 aaKnown RBP11.08□□□□□ -0.64
CPNE1-214ENST00000435747 POMGNT1Q8WZA1 660 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 HPS3Q969F9 1004 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 TRMT2BQ96GJ1 504 aaKnown RBP11.08□□□□□ -0.64
CPNE1-214ENST00000435747 FAM84AQ96KN4 292 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 MRGPRX1Q96LB2 322 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 ACCSQ96QU6 501 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 CBWD1Q9BRT8 395 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 CUEDC2Q9H467 287 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 PANK4Q9NVE7 773 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 DPP3Q9NY33 737 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 WSB2Q9NYS7 404 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-214ENST00000435747 DSEQ9UL01 958 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 ARID1BQ8NFD5 2236 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-214ENST00000435747 METTL12A8MUP2 240 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 KLK10O43240 276 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 PRPF6O94906 941 aaKnown RBP11.07□□□□□ -0.64
CPNE1-214ENST00000435747 IL18RAPO95256 599 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 GCNT3O95395 438 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 LDOC1O95751 146 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-214ENST00000435747 AFPP02771 609 aaKnown RBP11.07□□□□□ -0.64
CPNE1-214ENST00000435747 PDIA4P13667 645 aaKnown RBP11.07□□□□□ -0.64
CPNE1-214ENST00000435747 IDEP14735 1019 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 IL9RQ01113 521 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 DNAJC3Q13217 504 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 TEAD4Q15561 434 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 DDR2Q16832 855 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 MIB1Q86YT6 1006 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 KIAA1958Q8N8K9 716 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 C1orf127Q8N9H9 656 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 KCNE4Q8WWG9 221 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 IGSF8Q969P0 613 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 SAAL1Q96ER3 474 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 CNDP2Q96KP4 475 aaKnown RBP11.07□□□□□ -0.64
CPNE1-214ENST00000435747 MYRFLQ96LU7 910 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 ZNF578Q96N58 590 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-214ENST00000435747 ZNF396Q96N95 335 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-214ENST00000435747 FAM213AQ9BRX8 229 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 CD248Q9HCU0 757 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 PCDHA7Q9UN72 937 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 EXOC7Q9UPT5 735 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 ZDHHC9Q9Y397 364 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 PCDHB13Q9Y5F0 798 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 RAD54BQ9Y620 910 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 PTPRJQ12913 1337 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 MYH10P35580 1976 aa11.07□□□□□ -0.64
CPNE1-214ENST00000435747 H0Y8X5 98 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 CBX4O00257 560 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 KCNK3O14649 394 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 SCAMP3O14828 347 aaKnown RBP11.06□□□□□ -0.64
CPNE1-214ENST00000435747 TGFB1I1O43294 461 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 GLDCP23378 1020 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 TAF6P49848 677 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 RIPPLY3P57055 190 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 RPL10AP62906 217 aaKnown RBP11.06□□□□□ -0.64
CPNE1-214ENST00000435747 ZXDBP98169 803 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 NFKB2Q00653 900 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 RESP18Q5W5W9 173 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 BTBD8Q5XKL5 378 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 EGFLAMQ63HQ2 1017 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 LIMS2Q7Z4I7 341 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 NAT16Q8N8M0 369 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 TERB1Q8NA31 727 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 ZNF507Q8TCN5 953 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 SNX19Q92543 992 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 TSC1Q92574 1164 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 HIC2Q96JB3 615 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 PKMYT1Q99640 499 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 C7orf25Q9BPX7 421 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 GZF1Q9H116 711 aaPredicted RBP11.06□□□□□ -0.64
CPNE1-214ENST00000435747 DEC1Q9P2X7 70 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 SIX4Q9UIU6 781 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 RCOR1Q9UKL0 485 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 ANKRD6Q9Y2G4 727 aa11.06□□□□□ -0.64
CPNE1-214ENST00000435747 LRBAP50851 2863 aa11.05□□□□□ -0.64
CPNE1-214ENST00000435747 GOLGA8IPA6NC78 632 aa11.05□□□□□ -0.64
CPNE1-214ENST00000435747 GOLGA8JA6NMD2 632 aa11.05□□□□□ -0.64
CPNE1-214ENST00000435747 KPNA7A9QM74 516 aa11.05□□□□□ -0.64
CPNE1-214ENST00000435747 EIF3DO15371 548 aaKnown RBP eCLIP11.05□□□□□ -0.64
CPNE1-214ENST00000435747 TULP3O75386 442 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms