RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NMRK2Q9NPI5 230 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 SLC5A4Q9NY91 659 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 TTC3P53804 2025 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 SMIM28A0A1B0GU29 152 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 GLTPD2A6NH11 291 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 SRGAP2BP0DMP2 458 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 ATP5DP30049 168 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 STAT4Q14765 748 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 USP50Q70EL3 339 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-203ENST00000434376 PPIL6Q8IXY8 311 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 TBCBQ99426 244 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 ABHD16BQ9H3Z7 469 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 GRID1Q9ULK0 1009 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 NUP205Q92621 2012 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 CYP2F1P24903 491 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 TKTP29401 623 aaKnown RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 SULT1E1P49888 294 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 TRMT10BQ6PF06 316 aaKnown RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 LRRC6Q86X45 466 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 UBR7Q8N806 425 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 BBOF1Q8ND07 529 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 MS4A4AQ96JQ5 239 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 UBN1Q9NPG3 1134 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 NKX1-2Q9UD57 310 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 KPNA7A9QM74 516 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 F8W810 466 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 CYB561D2O14569 222 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 TNPO2O14787 897 aaKnown RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 APOL1O14791 398 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 GAS2O43903 313 aaKnown RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 CBX6O95503 412 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 SLC26A2P50443 739 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 PTK7Q13308 1070 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 DUSP28Q4G0W2 176 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 PPP1R15BQ5SWA1 713 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 NOTUMQ6P988 496 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 SLC27A1Q6PCB7 646 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 KCNT2Q6UVM3 1135 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 PIGZQ86VD9 579 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 CELF6Q96J87 481 aaKnown RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 L3MBTL3Q96JM7 780 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 PPP1R36Q96LQ0 422 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 NUDCD1Q96RS6 583 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 AP5M1Q9H0R1 490 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 PCDH9Q9HC56 1237 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 M0QYT0 321 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 GABBR2O75899 941 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 MOCS2O96007 188 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 ZNF143P52747 638 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 ZNF268Q14587 947 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 MFSD10Q14728 455 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 MAP7D3Q8IWC1 876 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 PNPLA1Q8N8W4 532 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 APPL2Q8NEU8 664 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 SLC7A14Q8TBB6 771 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 ZCWPW1Q9H0M4 648 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 ASB7Q9H672 318 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 ZC3H7BQ9UGR2 993 aaKnown RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 AP4E1Q9UPM8 1137 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 CNTN6Q9UQ52 1028 aa16.16■□□□□ 0.18
SCARF1-203ENST00000434376 TRIP12Q14669 1992 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-203ENST00000434376 WDR81Q562E7 1941 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-203ENST00000434376 TCRBV5S1A1TA0A578 114 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 C2CD4BA6NLJ0 364 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 CXorf49A8MYA2 514 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-203ENST00000434376 PFKMP08237 780 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 ARPP19P56211 112 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 BBS12Q6ZW61 710 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 ZNF354CQ86Y25 554 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 PLD5Q8N7P1 536 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 SLC35B2Q8TB61 432 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 BCO2Q9BYV7 579 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 SHCBP1LQ9BZQ2 653 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 ZNF518BQ9C0D4 1074 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 PCMTD2Q9NV79 361 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 PCDHGC3Q9UN70 934 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 METTL18O95568 372 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 MUM1Q2TAK8 710 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 SDHAF4Q5VUM1 108 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 SYPL2Q5VXT5 272 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 C16orf46Q6P387 395 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 DSTYKQ6XUX3 929 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 PDCD7Q8N8D1 485 aaKnown RBP16.15■□□□□ 0.18
SCARF1-203ENST00000434376 ATP11CQ8NB49 1132 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 MAML1Q92585 1016 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 NAF1Q96HR8 494 aaKnown RBP16.15■□□□□ 0.18
SCARF1-203ENST00000434376 PHTF1Q9UMS5 762 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 NOD1Q9Y239 953 aa16.15■□□□□ 0.18
SCARF1-203ENST00000434376 C3orf70A6NLC5 250 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-203ENST00000434376 TRIM49D1C9J1S8 452 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 HDAC4P56524 1084 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 IRX1P78414 480 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-203ENST00000434376 TCEAL1Q15170 157 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 SIX6OS1Q8N1H7 587 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 ZNF483Q8TF39 744 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-203ENST00000434376 RNF157Q96PX1 679 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 ZIC5Q96T25 663 aa16.14■□□□□ 0.17
SCARF1-203ENST00000434376 WDR83Q9BRX9 315 aaKnown RBP16.14■□□□□ 0.17
SCARF1-203ENST00000434376 ROPN1BQ9BZX4 212 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms