RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 TFE3P19532 575 aaPredicted RBP7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 ANXA13P27216 316 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 CYLC1P35663 651 aaPredicted RBP7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 PRKCIP41743 596 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 RAP1GAPP47736 663 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 CLCNKBP51801 687 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 DEFB103AP81534 67 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 DSC1Q08554 894 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 INCA1Q0VD86 236 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 UPP1Q16831 310 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 TMEM270Q6UE05 265 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 OTOP2Q7RTS6 562 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 VPS36Q86VN1 386 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 TMEM139Q8IV31 216 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 FAM71AQ8IYT1 594 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 RBBP8NLQ8NC74 664 aaPredicted RBP7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 RIN3Q8TB24 985 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 VWCEQ96DN2 955 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 GUCD1Q96NT3 240 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 MMS19Q96T76 1030 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 DNAI2Q9GZS0 605 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 CYP3A43Q9HB55 503 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 RC3H2Q9HBD1 1191 aaKnown RBP7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 PRDM7Q9NQW5 492 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 CISHQ9NSE2 258 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 MBNL3Q9NUK0 354 aaKnown RBP7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 MIOSQ9NXC5 875 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 STXBP5LQ9Y2K9 1186 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 ZKSCAN5Q9Y2L8 839 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 PCDHB4Q9Y5E5 795 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 SNX11Q9Y5W9 270 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 SNX9Q9Y5X1 595 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 BZW2Q9Y6E2 419 aaKnown RBP7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 TRANK1O15050 2925 aa7.32□□□□□ -1.24
GTF2A1-202ENST00000434192 PRR33A8MZF0 331 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 FOXN3O00409 490 aaPredicted RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 GFRA2O00451 464 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 HUS1O60921 280 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 DGKIO75912 1065 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 B3GAT3O94766 335 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 FGBP02675 491 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 WEE2P0C1S8 567 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 JUNBP17275 347 aaPredicted RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 ACO1P21399 889 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 MSNP26038 577 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 OR1G1P47890 313 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 AARSP49588 968 aaKnown RBP eCLIP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 GATMP50440 423 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 KIF11P52732 1056 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 ZNF132P52740 706 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 BPIFB4P59827 614 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 LILRA4P59901 499 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 IKZF1Q13422 519 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 RAB30Q15771 203 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 PAN2Q504Q3 1202 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 PRAMEF13Q5VWM6 474 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 WDR59Q6PJI9 974 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 DSTYKQ6XUX3 929 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 DPH6Q7L8W6 267 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 ZNF677Q86XU0 584 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 COLGALT2Q8IYK4 626 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 CMTR2Q8IYT2 770 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 CCDC170Q8IYT3 715 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 ADGRF2Q8IZF7 708 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 UBR7Q8N806 425 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 MFSD2AQ8NA29 543 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 APPL2Q8NEU8 664 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 HASPINQ8TF76 798 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 TOP1MTQ969P6 601 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 ASIC4Q96FT7 647 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 CCDC42Q96M95 316 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 ZNF830Q96NB3 372 aaPredicted RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 CASD1Q96PB1 797 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 SLC9A7Q96T83 725 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 YME1L1Q96TA2 773 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 PAAF1Q9BRP4 392 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 TMEM175Q9BSA9 504 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 TTYH1Q9H313 450 aaPredicted RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 HAUS4Q9H6D7 363 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 NHEJ1Q9H9Q4 299 aaPredicted RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 LUC7LQ9NQ29 371 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 BRWD1Q9NSI6 2320 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 GDAP2Q9NXN4 497 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 ARHGAP20Q9P2F6 1191 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 CACNG4Q9UBN1 327 aa7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 MTCL1Q9Y4B5 1905 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-202ENST00000434192 SF3B1O75533 1304 aaKnown RBP eCLIP7.3□□□□□ -1.248e-6■■■■■ 107
GTF2A1-202ENST00000434192 CYB561D2O14569 222 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 CCP110O43303 1012 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 THAP12O43422 761 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 TRAPPC3O43617 180 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 AKR1B10O60218 316 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 B4GALT3O60512 393 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 CILPO75339 1184 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 TACC1O75410 805 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 DDHD2O94830 711 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 NDUFA10O95299 355 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 PAPLNO95428 1278 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 PGRP06401 933 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 PLEKP08567 350 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms