RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 C2CD4BA6NLJ0 364 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 ZNF814B7Z6K7 855 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 INPPL1O15357 1258 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 CTNND1O60716 968 aaKnown RBP4.54□□□□□ -1.68
PTPN4-205ENST00000433888 RASSF9O75901 435 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 IL1R1P14778 569 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 BTF3P20290 206 aaKnown RBP4.54□□□□□ -1.68
PTPN4-205ENST00000433888 CPA2P48052 419 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 CPT1AP50416 773 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 SLC29A2Q14542 456 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 CNN3Q15417 329 aaKnown RBP4.54□□□□□ -1.68
PTPN4-205ENST00000433888 PFKFB3Q16875 520 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-205ENST00000433888 C3orf38Q5JPI3 329 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 ZNF549Q6P9A3 640 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 C16orf71Q8IYS4 520 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-205ENST00000433888 KRT78Q8N1N4 520 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 BCAS4Q8TDM0 211 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 P2RY11Q96G91 374 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 PRR11Q96HE9 360 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-205ENST00000433888 STK31Q9BXU1 1019 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 CHST8Q9H2A9 424 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 USP29Q9HBJ7 922 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 STEAP1Q9UHE8 339 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 SLC27A6Q9Y2P4 619 aa4.54□□□□□ -1.68
PTPN4-205ENST00000433888 COL15A1P39059 1388 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 IGLV5-39A0A0G2JS06 123 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 TLX3O43711 291 aaPredicted RBP4.53□□□□□ -1.68
PTPN4-205ENST00000433888 PLAUP00749 431 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 TXNP10599 105 aaKnown RBP4.53□□□□□ -1.68
PTPN4-205ENST00000433888 ACVR2AP27037 513 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 NTSR1P30989 418 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 COPAP53621 1224 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 CNGA2Q16280 664 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 ST3GAL2Q16842 350 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 GRHL2Q6ISB3 625 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 TFAP2DQ7Z6R9 452 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 NGDNQ8NEJ9 315 aaKnown RBP4.53□□□□□ -1.68
PTPN4-205ENST00000433888 B4GALNT2Q8NHY0 566 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 TRMT61AQ96FX7 289 aaKnown RBP4.53□□□□□ -1.68
PTPN4-205ENST00000433888 ZDHHC12Q96GR4 267 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 CTAGE1Q96RT6 745 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 SELENOOQ9BVL4 669 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 GATA5Q9BWX5 397 aaPredicted RBP4.53□□□□□ -1.68
PTPN4-205ENST00000433888 NUAK2Q9H093 628 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 FAM83DQ9H4H8 585 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 VPS45Q9NRW7 570 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 AFF4Q9UHB7 1163 aaKnown RBP4.53□□□□□ -1.68
PTPN4-205ENST00000433888 MID2Q9UJV3 735 aa4.53□□□□□ -1.68
PTPN4-205ENST00000433888 AQP7P3A6NL99 342 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 CA12O43570 354 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 PDGFRBP09619 1106 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 HTR7P34969 479 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 EIF4A1P60842 406 aaKnown RBP4.52□□□□□ -1.69
PTPN4-205ENST00000433888 RPS16P62249 146 aaKnown RBP4.52□□□□□ -1.69
PTPN4-205ENST00000433888 FMO1Q01740 532 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 MTAPQ13126 283 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 STK3Q13188 491 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 DNASE1L3Q13609 305 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 KPNB1Q14974 876 aaKnown RBP4.52□□□□□ -1.69
PTPN4-205ENST00000433888 CLCA4Q14CN2 919 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 MANEALQ5VSG8 457 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 DAB2IPQ5VWQ8 1189 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 PLAG1Q6DJT9 500 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 LVRNQ6Q4G3 990 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 FAM71DQ8N9W8 422 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 ZNF668Q96K58 619 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-205ENST00000433888 HIST1H2AAQ96QV6 131 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 TPCN1Q9ULQ1 816 aa4.52□□□□□ -1.69
PTPN4-205ENST00000433888 CFAP69A5D8W1 941 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 A6NNZ2 444 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 FAM227AF5H4B4 570 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 RAB27BO00194 218 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 EPN2O95208 641 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 BRAFP15056 766 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 TPH1P17752 444 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 HOXA7P31268 230 aaPredicted RBP4.51□□□□□ -1.69
PTPN4-205ENST00000433888 GALNSP34059 522 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 CDKN2AP42771 156 aaKnown RBP4.51□□□□□ -1.69
PTPN4-205ENST00000433888 KCNAB1Q14722 419 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 CLEC9AQ6UXN8 241 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 SESTD1Q86VW0 696 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 VPS50Q96JG6 964 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 FCRL5Q96RD9 977 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 SCNM1Q9BWG6 230 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 TMEM45AQ9NWC5 275 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 DDX56Q9NY93 547 aaKnown RBP4.51□□□□□ -1.69
PTPN4-205ENST00000433888 DNAJB11Q9UBS4 358 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 HDAC9Q9UKV0 1011 aa4.51□□□□□ -1.69
PTPN4-205ENST00000433888 MARCH6O60337 910 aa4.5□□□□□ -1.69
PTPN4-205ENST00000433888 CD63P08962 238 aa4.5□□□□□ -1.69
PTPN4-205ENST00000433888 ZKSCAN1P17029 563 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-205ENST00000433888 IBSPP21815 317 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-205ENST00000433888 IDUAP35475 653 aa4.5□□□□□ -1.69
PTPN4-205ENST00000433888 TXNL4AP83876 142 aaKnown RBP4.5□□□□□ -1.69
PTPN4-205ENST00000433888 CCDC15Q0P6D6 951 aa4.5□□□□□ -1.69
PTPN4-205ENST00000433888 FAM57BQ71RH2 274 aa4.5□□□□□ -1.69
PTPN4-205ENST00000433888 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.5□□□□□ -1.69
PTPN4-205ENST00000433888 SLC25A28Q96A46 364 aa4.5□□□□□ -1.69
PTPN4-205ENST00000433888 MSI2Q96DH6 328 aaKnown RBP4.5□□□□□ -1.69
PTPN4-205ENST00000433888 THOC3Q96J01 351 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms