RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.05■□□□□ 0.16
CNOT9-205ENST00000433439 CLIC5Q9NZA1 410 aa16.05■□□□□ 0.16
CNOT9-205ENST00000433439 COX16Q9P0S2 106 aa16.05■□□□□ 0.16
CNOT9-205ENST00000433439 SFMBT1Q9UHJ3 866 aa16.05■□□□□ 0.16
CNOT9-205ENST00000433439 TFR2Q9UP52 801 aa16.05■□□□□ 0.16
CNOT9-205ENST00000433439 FAM50BQ9Y247 325 aa16.05■□□□□ 0.16
CNOT9-205ENST00000433439 ANAPC1Q9H1A4 1944 aa16.05■□□□□ 0.16
CNOT9-205ENST00000433439 ARHGAP6O43182 974 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 DAB1O75553 588 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 OAS1P00973 400 aaKnown RBP16.04■□□□□ 0.16
CNOT9-205ENST00000433439 FYNP06241 537 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 GLI1P08151 1106 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 HMBSP08397 361 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 IRF1P10914 325 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 DDX6P26196 483 aaKnown RBP eCLIP16.04■□□□□ 0.16
CNOT9-205ENST00000433439 FLT3P36888 993 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 SCNN1AP37088 669 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 SULT1E1P49888 294 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 MAMLD1Q13495 774 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 AAK1Q2M2I8 961 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 PUS10Q3MIT2 529 aaKnown RBP16.04■□□□□ 0.16
CNOT9-205ENST00000433439 SNX30Q5VWJ9 437 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 OTOP3Q7RTS5 596 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 CMTM8Q8IZV2 173 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 ADAM32Q8TC27 787 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 TRIM62Q9BVG3 475 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 NUP85Q9BW27 656 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.04■□□□□ 0.16
CNOT9-205ENST00000433439 MARCH2Q9P0N8 246 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 CTTNBP2NLQ9P2B4 639 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 DNMT3LQ9UJW3 386 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 DENND4CQ5VZ89 1909 aa16.04■□□□□ 0.16
CNOT9-205ENST00000433439 SLC12A8A0AV02 714 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 SIGLEC16A6NMB1 481 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 MSI1O43347 362 aaKnown RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 LCA5LO95447 670 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 TMEM253P0C7T8 217 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 RFC1P35251 1148 aaPredicted RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 TUBP50607 506 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 GSCP56915 257 aaPredicted RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 RPL7AP62424 266 aaKnown RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 PITX1P78337 314 aaPredicted RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 KRT83P78385 493 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 SMAD2Q15796 467 aaKnown RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 CDO1Q16878 200 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 C10orf76Q5T2E6 689 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 PLEKHA7Q6IQ23 1121 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 ARID3BQ8IVW6 561 aaPredicted RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 TDRD5Q8NAT2 981 aaKnown RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 DQX1Q8TE96 717 aaKnown RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 RXFP2Q8WXD0 754 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 ACSF2Q96CM8 615 aaPredicted RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 CFAP57Q96MR6 1250 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 SLC2A13Q96QE2 648 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 CDK5RAP1Q96SZ6 601 aaKnown RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 PHF7Q9BWX1 381 aaPredicted RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 KCNF1Q9H3M0 494 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 FAM204AQ9H8W3 233 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 MRPL47Q9HD33 250 aaKnown RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 GKN1Q9NS71 199 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 OLA1Q9NTK5 396 aaKnown RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 TMEM59LQ9UK28 342 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 STAP1Q9ULZ2 295 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 REXO2Q9Y3B8 237 aaKnown RBP16.03■□□□□ 0.16
CNOT9-205ENST00000433439 CPQQ9Y646 472 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 SCINQ9Y6U3 715 aa16.03■□□□□ 0.16
CNOT9-205ENST00000433439 DENND4AQ7Z401 1863 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 TCRBV5S1A1TA0A578 114 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 C2CD4DB7Z1M9 353 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 M0QYT0 321 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 DPYSL4O14531 572 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 SCAMP3O14828 347 aaKnown RBP16.02■□□□□ 0.16
CNOT9-205ENST00000433439 CYP1A2P05177 515 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 LAMP2P13473 410 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 PDGFRAP16234 1089 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 GPD1P21695 349 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 SDC4P31431 198 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 NOS2P35228 1153 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 MATKP42679 507 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 ATP11AP98196 1134 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 NME3Q13232 169 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 FAM78AQ5JUQ0 283 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 TRNP1Q6NT89 227 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 TAC4Q86UU9 113 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 TRIM7Q9C029 511 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 GDE1Q9NZC3 331 aa16.02■□□□□ 0.16
CNOT9-205ENST00000433439 EYSQ5T1H1 3165 aa16.01■□□□□ 0.15
CNOT9-205ENST00000433439 TMEM110-MUSTN1A8MSY1 372 aa16.01■□□□□ 0.15
CNOT9-205ENST00000433439 PRAMEF12O95522 483 aa16.01■□□□□ 0.15
CNOT9-205ENST00000433439 TRUB2O95900 331 aaKnown RBP16.01■□□□□ 0.15
CNOT9-205ENST00000433439 TFE3P19532 575 aaPredicted RBP16.01■□□□□ 0.15
CNOT9-205ENST00000433439 VIPR2P41587 438 aa16.01■□□□□ 0.15
CNOT9-205ENST00000433439 NOP2P46087 812 aaKnown RBP16.01■□□□□ 0.15
CNOT9-205ENST00000433439 C15orf59Q2T9L4 293 aaPredicted RBP16.01■□□□□ 0.15
CNOT9-205ENST00000433439 MSANTD2Q6P1R3 559 aa16.01■□□□□ 0.15
CNOT9-205ENST00000433439 ZNF564Q8TBZ8 553 aaPredicted RBP16.01■□□□□ 0.15
CNOT9-205ENST00000433439 SMARCD2Q92925 531 aa16.01■□□□□ 0.15
CNOT9-205ENST00000433439 USP13Q92995 863 aaPredicted RBP16.01■□□□□ 0.15
CNOT9-205ENST00000433439 RNF34Q969K3 372 aa16.01■□□□□ 0.15
CNOT9-205ENST00000433439 BTBD6Q96KE9 485 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms