RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 LCN1P1Q5VSP4 162 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SCARA3Q6AZY7 606 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 FCRLBQ6BAA4 426 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 FBXO42Q6P3S6 717 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF530Q6P9A1 599 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 DEGS2Q6QHC5 323 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 CNGA4Q8IV77 575 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF654Q8IZM8 581 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ALLCQ8N6M5 410 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 NIPA2Q8N8Q9 360 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 OR9A1PQ8NGU1 263 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 NANPQ8TBE9 248 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 DDX54Q8TDD1 881 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 CIDECQ96AQ7 238 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SEMA4CQ9C0C4 833 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 CYP26B1Q9NR63 512 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 NDE1Q9NXR1 346 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 TRPM5Q9NZQ8 1165 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 TARBP1Q13395 1621 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 KBTBD13C9JR72 458 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 TM9SF1O15321 606 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 WBP4O75554 376 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 RPS6KA5O75582 802 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 CYP3A4P08684 503 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 IGFBP1P08833 259 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 STAG3L3P0CL85 134 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF280AP59817 542 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 POU6F2P78424 691 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ADAM9Q13443 819 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 KCNC3Q14003 757 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 MBTPS1Q14703 1052 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 C16orf72Q14CZ0 275 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 DLGAP5Q15398 846 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF827Q17R98 1081 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 LRIG3Q6UXM1 1119 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ADCK1Q86TW2 530 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 MINDY1Q8N5J2 469 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 OR14C36Q8NHC7 312 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 L3MBTL2Q969R5 705 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 PPP1R14AQ96A00 147 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 TRAPPC9Q96Q05 1148 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 UBAC1Q9BSL1 405 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 IGFLR1Q9H665 355 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 C10orf88Q9H8K7 445 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SP110Q9HB58 689 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 PNPLA8Q9NP80 782 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 CD274Q9NZQ7 290 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SERPINB13Q9UIV8 391 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 MAPRE3Q9UPY8 281 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SH3TC1Q8TE82 1336 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 WRNQ14191 1432 aaPredicted RBP eCLIP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 TRIM3O75382 744 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-203ENST00000430976 FGF18O76093 207 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 PLEKHA8P1O95397 391 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 CRTAMO95727 393 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 PTBP3O95758 552 aaKnown RBP5.53□□□□□ -1.52
PTPN4-203ENST00000430976 NTRK1P04629 796 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 IFNA16P05015 189 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 FGF4P08620 206 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 GSTA2P09210 222 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 SELLP14151 372 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 IREB2P48200 963 aaKnown RBP5.53□□□□□ -1.52
PTPN4-203ENST00000430976 ARSEP51690 589 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 GNG2P59768 71 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 HTRA4P83105 476 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-203ENST00000430976 TYRO3Q06418 890 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 DSC1Q08554 894 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 TRIM32Q13049 653 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 ERV3-1Q14264 604 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 MESDQ14696 234 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 ALG11Q2TAA5 492 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 CCDC58Q4VC31 144 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 RNF219Q5W0B1 726 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-203ENST00000430976 KRT39Q6A163 491 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 IQSEC1Q6DN90 963 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 SYDE1Q6ZW31 735 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-203ENST00000430976 ERN2Q76MJ5 926 aaKnown RBP5.53□□□□□ -1.52
PTPN4-203ENST00000430976 SSX9Q7RTT3 188 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 ARHGAP24Q8N264 748 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 HIPK4Q8NE63 616 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 CEP76Q8TAP6 659 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 LRRC20Q8TCA0 184 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 TRIB2Q92519 343 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 CBX8Q9HC52 389 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 IL19Q9UHD0 177 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 POFUT2Q9Y2G5 429 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 DERAQ9Y315 318 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 M0QZ92 97 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 MED7O43513 233 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 IDH3BO43837 385 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 CTNND1O60716 968 aaKnown RBP5.53□□□□□ -1.52
PTPN4-203ENST00000430976 ATP6V1G2O95670 118 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 AKT1P31749 480 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 ACTR1AP61163 376 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 GRIN1Q05586 938 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 CDK18Q07002 472 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 TM4SF20Q53R12 229 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 KRBOX4Q5JUW0 171 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 SLC27A3Q5K4L6 730 aa5.53□□□□□ -1.52
PTPN4-203ENST00000430976 TXNDC11Q6PKC3 985 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms