RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 MAD2L1Q13257 205 aaPredicted RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 HAUS6Q7Z4H7 955 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 USP7Q93009 1102 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 XPR1Q9UBH6 696 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 TMEM5Q9Y2B1 443 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 OR7A10O76100 309 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 PAX7P23759 505 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 MYL9P24844 172 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 PTGS2P35354 604 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 NAA30Q147X3 362 aaPredicted RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 NR6A1Q15406 480 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 TMEM132CQ8N3T6 1108 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 PLEKHG4BQ96PX9 1271 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 UNKQ9C0B0 810 aaKnown RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 VTI1BQ9UEU0 232 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 LIMD1Q9UGP4 676 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 PLCL2Q9UPR0 1127 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 RGS10O43665 173 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 SLC34A1Q06495 639 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 RASGRP2Q7LDG7 609 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 FLAD1Q8NFF5 587 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 PSMA8Q8TAA3 256 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 SLC4A9Q96Q91 983 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 RASSF1Q9NS23 344 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 OR14I1A6ND48 311 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 RAD51CO43502 376 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 ADD2P35612 726 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 TCHHL1Q5QJ38 904 aaPredicted RBP16.9■□□□□ 0.3
RIF1-204ENST00000430328 CXXC5Q7LFL8 322 aaKnown RBP16.9■□□□□ 0.3
RIF1-204ENST00000430328 JAMLQ86YT9 394 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 MAGEE2Q8TD90 523 aaPredicted RBP16.9■□□□□ 0.3
RIF1-204ENST00000430328 MAGEB10Q96LZ2 347 aaPredicted RBP16.9■□□□□ 0.3
RIF1-204ENST00000430328 YME1L1Q96TA2 773 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 RSL24D1Q9UHA3 163 aaKnown RBP16.9■□□□□ 0.3
RIF1-204ENST00000430328 LYVE1Q9Y5Y7 322 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 A0A0G2JPF8 293 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 HNRNPCL3B7ZW38 293 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 HNRNPCL4P0DMR1 293 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 PSME3P61289 254 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 Q96MT0 163 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 APEX2Q9UBZ4 518 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
RIF1-204ENST00000430328 RPS6KL1Q9Y6S9 549 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 PSMD11O00231 422 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 KRT36O76013 467 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 HMBSP08397 361 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 ATF6P18850 670 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 AQP5P55064 265 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 MTDHQ86UE4 582 aaKnown RBP16.9■□□□□ 0.3
RIF1-204ENST00000430328 NUDT12Q9BQG2 462 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 LIFRP42702 1097 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 DLG1Q12959 904 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 GRB14Q14449 540 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 RIPOR1Q6ZS17 1223 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 DHFR2Q86XF0 187 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 LRRC34Q8IZ02 419 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 CLN6Q9NWW5 311 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 CHL1O00533 1208 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 MTSS1LQ765P7 747 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 ADHFE1Q8IWW8 467 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 DCAF4Q8WV16 495 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 CHST12Q9NRB3 414 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 GJA1P17302 382 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 TUBA4AP68366 448 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 DCAF6Q58WW2 860 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 KDM7AQ6ZMT4 941 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 PHACTR4Q8IZ21 702 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 GUF1Q8N442 669 aaKnown RBP16.9■□□□□ 0.3
RIF1-204ENST00000430328 NUP50Q9UKX7 468 aa16.9■□□□□ 0.3
RIF1-204ENST00000430328 CDK13Q14004 1512 aaKnown RBP16.89■□□□□ 0.3
RIF1-204ENST00000430328 MYL4P12829 197 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 WASHC2DQ5SRD0 308 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 EFR3BQ9Y2G0 817 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 IRF1P10914 325 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 SLC15A2Q16348 729 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 DHFRP00374 187 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 ETFBP38117 255 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 KCNMA1Q12791 1236 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 ZFP69Q49AA0 526 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 PERM1Q5SV97 790 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 MYCBPAPQ8TBZ2 947 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 ZNF232Q9UNY5 417 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 GIT1Q9Y2X7 761 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 STIP1P31948 543 aaKnown RBP16.89■□□□□ 0.29
RIF1-204ENST00000430328 MAPK10P53779 464 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 RNF145Q96MT1 663 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 CLPBQ9H078 707 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 WRBO00258 174 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 ULK1O75385 1050 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 CIAO1O76071 339 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 RARBP10826 455 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 TKTP29401 623 aaKnown RBP16.89■□□□□ 0.29
RIF1-204ENST00000430328 AAR2Q9Y312 384 aaKnown RBP16.89■□□□□ 0.29
RIF1-204ENST00000430328 USP27XA6NNY8 438 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 PLOD2O00469 737 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 SLC26A3P40879 764 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 C8orf59Q8N0T1 100 aaPredicted RBP16.89■□□□□ 0.29
RIF1-204ENST00000430328 GRIP2Q9C0E4 1043 aa16.89■□□□□ 0.29
RIF1-204ENST00000430328 REEP1Q9H902 201 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms