RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ANKRD33BA6NCL7 494 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 A8MXQ7 604 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 LACTBL1A8MY62 500 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 NEMP1O14524 444 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 TP73O15350 636 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 TBC1D12O60347 775 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 USP12O75317 370 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 TAP1Q03518 808 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 KHDC1Q4VXA5 237 aaKnown RBP8.35□□□□□ -1.07
HPS4-205ENST00000429411 TMEM63BQ5T3F8 832 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 SNX30Q5VWJ9 437 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 IL31Q6EBC2 164 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 FAM131BQ86XD5 332 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 IGDCC3Q8IVU1 814 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 CHCHD4Q8N4Q1 142 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 RNF169Q8NCN4 708 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 SERAC1Q96JX3 654 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 TEPSINQ96N21 525 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 GBP5Q96PP8 586 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 RSAD1Q9HA92 442 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 KLK14Q9P0G3 267 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 TSPAN16Q9UKR8 245 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 HES2Q9Y543 173 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 POLR2AP24928 1970 aaKnown RBP8.35□□□□□ -1.07
HPS4-205ENST00000429411 CLUHO75153 1309 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 SPATA31C2B4DYI2 1134 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 ATP9BO43861 1147 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 SNRPAP09012 282 aaKnown RBP8.35□□□□□ -1.07
HPS4-205ENST00000429411 GTF2A2P52657 109 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 ATXN1P54253 815 aaKnown RBP8.35□□□□□ -1.07
HPS4-205ENST00000429411 KLC1Q07866 573 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 CRHR2Q13324 411 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 C4orf46Q504U0 113 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 ATG16L1Q676U5 607 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 PPP1R2P3Q6NXS1 205 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 MPZL3Q6UWV2 235 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 RAPH1Q70E73 1250 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 RASAL3Q86YV0 1011 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 CD99L2Q8TCZ2 262 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 TMEM176AQ96HP8 235 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 SCYL1Q96KG9 808 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 TSC22D3Q99576 134 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 FERMT1Q9BQL6 677 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 MED10Q9BTT4 135 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 NMUR2Q9GZQ4 415 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 PRM3Q9NNZ6 103 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 LGALS13Q9UHV8 139 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 SCOCQ9UIL1 159 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 DNAH12Q6ZR08 3092 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 SPDYE16A6NNV3 312 aaPredicted RBP8.35□□□□□ -1.07
HPS4-205ENST00000429411 BHMG1C9JSJ3 638 aaPredicted RBP8.35□□□□□ -1.07
HPS4-205ENST00000429411 PLA2G6O60733 806 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 ZMPSTE24O75844 475 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 ITGAVP06756 1048 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 CYP2B6P20813 491 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 TYK2P29597 1187 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 STX3Q13277 289 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 MXD4Q14582 209 aaPredicted RBP8.35□□□□□ -1.07
HPS4-205ENST00000429411 TMEM132DQ14C87 1099 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 SURF1Q15526 300 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 GRAMD1BQ3KR37 738 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 TREML2Q5T2D2 321 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 IER5Q5VY09 327 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 UNC5BQ8IZJ1 945 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 TEX9Q8N6V9 391 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 BRI3BPQ8WY22 251 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 SLCO2A1Q92959 643 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 PGBD4Q96DM1 585 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 PIWIL1Q96J94 861 aaKnown RBP8.35□□□□□ -1.07
HPS4-205ENST00000429411 DHX33Q9H6R0 707 aaKnown RBP8.35□□□□□ -1.07
HPS4-205ENST00000429411 ACSS3Q9H6R3 686 aa8.35□□□□□ -1.07
HPS4-205ENST00000429411 BTBD19C9JJ37 291 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 NDC80O14777 642 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 LYPLA1O75608 230 aaPredicted RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 GJA5P36382 358 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 ARL4AP40617 200 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 RFC5P40937 340 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 BST1Q10588 318 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 WDR75Q8IWA0 830 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 DCLK2Q8N568 766 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 VPS37AQ8NEZ2 397 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 USP6NLQ92738 828 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 ACO2Q99798 780 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 SPATS2LQ9NUQ6 558 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 RNF186Q9NXI6 227 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 CPSF2Q9P2I0 782 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 SIGLEC16A6NMB1 481 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 GOLGA8TH3BQL2 631 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 APOC4-APOC2K7ER74 178 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 TNPO2O14787 897 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 DGKIO75912 1065 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 PDE5AO76074 875 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 USP1O94782 785 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 LSM8O95777 96 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 APOC2P02655 101 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 ABHD2P08910 425 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 ZNF286BP0CG31 522 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 FGFR1P11362 822 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 EIF4BP23588 611 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 GMPRP36959 345 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms