RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 LRG1P02750 347 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 UCHL3P15374 230 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 CTHP32929 405 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 MAGEA1P43355 309 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 MAPK8P45983 427 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 CASP4P49662 377 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 POLR2FP61218 127 aaKnown RBP9.19□□□□□ -0.94
HDAC1-202ENST00000428704 ROR1Q01973 937 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 CCINQ13939 588 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 SLC18A3Q16572 532 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 ZNF423Q2M1K9 1284 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 SLFN12LQ6IEE8 588 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 SLC8B1Q6J4K2 584 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 ANKS3Q6ZW76 656 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 PDZD4Q76G19 769 aaPredicted RBP9.19□□□□□ -0.94
HDAC1-202ENST00000428704 RTL10Q7L3V2 364 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 CYP2U1Q7Z449 544 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 IRF2BP2Q7Z5L9 587 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 RALGPS2Q86X27 583 aaPredicted RBP9.19□□□□□ -0.94
HDAC1-202ENST00000428704 MFSD6LQ8IWD5 586 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 FAM186BQ8IYM0 893 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 TTC8Q8TAM2 541 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 MDM1Q8TC05 714 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 LRRN4Q8WUT4 740 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 POMGNT1Q8WZA1 660 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 GOLGA1Q92805 767 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 TCEAL4Q96EI5 215 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 SAAL1Q96ER3 474 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 FAM84AQ96KN4 292 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 ACCSQ96QU6 501 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 CORO1BQ9BR76 489 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 CBWD1Q9BRT8 395 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 SIX2Q9NPC8 291 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 FAM53CQ9NYF3 392 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 FRMD4BQ9Y2L6 1034 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 JRKLQ9Y4A0 524 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 MYBPHLA2RUH7 354 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 HEPACAM2A8MVW5 462 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 PIRO00625 290 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 CLIC2O15247 247 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 ATG13O75143 517 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 TACC1O75410 805 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 ABLIM3O94929 683 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 VNN2O95498 520 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 PLEKP08567 350 aaPredicted RBP9.18□□□□□ -0.94
HDAC1-202ENST00000428704 SLC9A1P19634 815 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 GARTP22102 1010 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 FMO5P49326 533 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 JAM2P57087 298 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 IRX4P78413 519 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 POU5F1Q01860 360 aaKnown RBP9.18□□□□□ -0.94
HDAC1-202ENST00000428704 LMAN2Q12907 356 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 TMEM132DQ14C87 1099 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 PRSS36Q5K4E3 855 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 C9orf57Q5W0N0 161 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 SCARA3Q6AZY7 606 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 PKN3Q6P5Z2 889 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 INTS8Q75QN2 995 aaKnown RBP9.18□□□□□ -0.94
HDAC1-202ENST00000428704 RAB44Q7Z6P3 723 aaPredicted RBP9.18□□□□□ -0.94
HDAC1-202ENST00000428704 BRSK2Q8IWQ3 736 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 CD302Q8IX05 232 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 CAMKK1Q8N5S9 505 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 LRRN4CLQ8ND94 238 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 ZSCAN18Q8TBC5 510 aaPredicted RBP9.18□□□□□ -0.94
HDAC1-202ENST00000428704 HHIPQ96QV1 700 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 TSPAN18Q96SJ8 248 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 DEF6Q9H4E7 631 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 ASB7Q9H672 318 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 ARGLU1Q9NWB6 273 aaPredicted RBP9.18□□□□□ -0.94
HDAC1-202ENST00000428704 MAP10Q9P2G4 905 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 EXOC7Q9UPT5 735 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 DERAQ9Y315 318 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 C2CD2Q9Y426 696 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 NUB1Q9Y5A7 615 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 SAR1BQ9Y6B6 198 aa9.18□□□□□ -0.94
HDAC1-202ENST00000428704 OBSL1O75147 1896 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 NCANO14594 1321 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 PTPRJQ12913 1337 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 MYO18BQ8IUG5 2567 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 GOLGA8IPA6NC78 632 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 GOLGA8JA6NMD2 632 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 ATXN7O15265 892 aaPredicted RBP9.17□□□□□ -0.94
HDAC1-202ENST00000428704 CHADO15335 359 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 XPOTO43592 962 aaKnown RBP9.17□□□□□ -0.94
HDAC1-202ENST00000428704 MICAL2O94851 1124 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 SEC24AO95486 1093 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 CCDC172P0C7W6 258 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 FERP16591 822 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 ELF1P32519 619 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 LILRA4P59901 499 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 CYP27A1Q02318 531 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 KLHL30Q0D2K2 578 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 BFSP1Q12934 665 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 ASIC2Q16515 512 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 CTXN3Q4LDR2 81 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 CYP4A22Q5TCH4 519 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 ZNF280DQ6N043 979 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 FBXO38Q6PIJ6 1188 aa9.17□□□□□ -0.94
HDAC1-202ENST00000428704 ZNF572Q7Z3I7 529 aaPredicted RBP9.17□□□□□ -0.94
HDAC1-202ENST00000428704 PIP4P1Q86T03 277 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms