RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ZMIZ2Q8NF64 920 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 SLC2A14Q8TDB8 520 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 FOXJ1Q92949 421 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 BHMTQ93088 406 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 ZNF419Q96HQ0 510 aaPredicted RBP19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 MRGPRX1Q96LB2 322 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 SDCBP2Q9H190 292 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 BEST1O76090 585 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 MAOBP27338 520 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 ATP5C1P36542 298 aaKnown RBP19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 NASPP49321 788 aaPredicted RBP19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 DGKGP49619 791 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 WDR45BQ5MNZ6 344 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 CNNM4Q6P4Q7 775 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 NAXDQ8IW45 347 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 IQUBQ8NA54 791 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 PLEKHO2Q8TD55 490 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 FAM49BQ9NUQ9 324 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 MARK1Q9P0L2 795 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 MTMR6Q9Y217 621 aa19.33■□□□□ 0.68
UPK3BP1-201ENST00000428678 GCN1Q92616 2671 aaKnown RBP19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 CELSR3Q9NYQ7 3312 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 MEI4A8MW99 385 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 WASH3PC4AMC7 463 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 SPTLC2O15270 562 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 GJB3O75712 270 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 FTH1P19P0C7X4 201 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 P4HA1P13674 534 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 SCAPQ12770 1279 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 GRIK2Q13002 908 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 UNC13DQ70J99 1090 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 C12orf56Q8IXR9 622 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 PNPLA1Q8N8W4 532 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 LINC00301Q8NCQ3 95 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 JAKMIP2Q96AA8 810 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 C7orf25Q9BPX7 421 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 ZSCAN16Q9H4T2 348 aaPredicted RBP19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 SLC39A2Q9NP94 309 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 CYLDQ9NQC7 956 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 PLK2Q9NYY3 685 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 CGNQ9P2M7 1197 aaKnown RBP19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 HMGXB4Q9UGU5 601 aa19.32■□□□□ 0.68
UPK3BP1-201ENST00000428678 ADAMTS20P59510 1910 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 LRRIQ3A6PVS8 624 aaPredicted RBP19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 GFRA2O00451 464 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 CYP26A1O43174 497 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 FAM200BP0CF97 657 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 ADORA2BP29275 332 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 CASP1P29466 404 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 CD6P30203 668 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 NDST1P52848 882 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 AP3M2P53677 418 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 STARD3Q14849 445 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 C19orf48Q6RUI8 117 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 GPRIN1Q7Z2K8 1008 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 C12orf29Q8N999 325 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 ADAMTS14Q8WXS8 1223 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 BLZF1Q9H2G9 400 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 CSNK1G1Q9HCP0 422 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 OSER1Q9NX31 292 aa19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 TFIP11Q9UBB9 837 aaKnown RBP19.31■□□□□ 0.68
UPK3BP1-201ENST00000428678 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 MDM4O15151 490 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 VNN1O95497 513 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 CAPNS1P04632 268 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 CISD3P0C7P0 127 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 EHHADHQ08426 723 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 KNOP1Q1ED39 458 aaKnown RBP19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 BMT2Q1RMZ1 405 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 FUT11Q495W5 492 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 PARD3BQ8TEW8 1205 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 TOE1Q96GM8 510 aaKnown RBP19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 ZDHHC5Q9C0B5 715 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 MIR1-1HGQ9H1L0 117 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 PRDM16Q9HAZ2 1276 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 NUDT5Q9UKK9 219 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 SCML2Q9UQR0 700 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 APOBEC2Q9Y235 224 aaKnown RBP19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 STON1Q9Y6Q2 735 aa19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 GOLGA4Q13439 2230 aaKnown RBP19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 SMG1Q96Q15 3661 aaKnown RBP19.3■□□□□ 0.68
UPK3BP1-201ENST00000428678 CABIN1Q9Y6J0 2220 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 A0A1B0GTW7 788 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 A0A1W2PQH9 124 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 C4BPAP04003 597 aaKnown RBP19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 RARGP13631 454 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 ACO1P21399 889 aaKnown RBP19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 C10orf120Q5SQS8 335 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 CRYBG2Q8N1P7 616 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 ZCCHC9Q8N567 271 aaKnown RBP19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 GOLGA5Q8TBA6 731 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 GPR174Q9BXC1 333 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 CCDC86Q9H6F5 360 aaKnown RBP19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 MAGEF1Q9HAY2 307 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 NMUR1Q9HB89 426 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 FOXD4L1Q9NU39 408 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 DNMT3LQ9UJW3 386 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 GPSM3Q9Y4H4 160 aa19.29■□□□□ 0.68
UPK3BP1-201ENST00000428678 PLXNB3Q9ULL4 1909 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms