RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 DNA2P51530 1060 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 MCCD1P59942 119 aaPredicted RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 CHSY1Q86X52 802 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 DDX42Q86XP3 938 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDC7-203ENST00000428239 SUSD6Q92537 303 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 FGF14Q92915 247 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 MYRFLQ96LU7 910 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 SERPINB11Q96P15 392 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 TTLL2Q9BWV7 592 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 SLC4A5Q9BY07 1137 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 EBF3Q9H4W6 596 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 PARVAQ9NVD7 372 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDC7-203ENST00000428239 COMMD8Q9NX08 183 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 ANAPC7Q9UJX3 599 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 CA14Q9ULX7 337 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 CCL26Q9Y258 94 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 PAXBP1Q9Y5B6 917 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 SCINQ9Y6U3 715 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 MYO1FO00160 1098 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 LEFTY2O00292 366 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 TRDMT1O14717 391 aaKnown RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 MMP8P22894 467 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 SLC11A2P49281 568 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 VCPP55072 806 aaKnown RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 TRIM68Q6AZZ1 485 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 TMEM110Q86TL2 294 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 ZDHHC17Q8IUH5 632 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 TXLNBQ8N3L3 684 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 WDTC1Q8N5D0 677 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 TC2NQ8N9U0 490 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 FLCNQ8NFG4 579 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 DQX1Q8TE96 717 aaKnown RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 DDI1Q8WTU0 396 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 RXFP2Q8WXD0 754 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 OVCA2Q8WZ82 227 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 USP13Q92995 863 aaPredicted RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 PIWIL1Q96J94 861 aaKnown RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 CFAP57Q96MR6 1250 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 ASB16Q96NS5 453 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 DESI2Q9BSY9 194 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 UBXN6Q9BZV1 441 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 RNF38Q9H0F5 515 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 CLIC5Q9NZA1 410 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 PCSK1NQ9UHG2 260 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 MUTYHQ9UIF7 546 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 TRANK1O15050 2925 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 HHLA1C9JL84 531 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 SLC9A3R1O14745 358 aaPredicted RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 DAPK3O43293 454 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 CORO1AP31146 461 aaKnown RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 GGCXP38435 758 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 PRKCIP41743 596 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 PGFP49763 221 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 CENPCQ03188 943 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 C1QBPQ07021 282 aaKnown RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 TDGQ13569 410 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 SLC18A3Q16572 532 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 ARL13BQ3SXY8 428 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 ZC3H12AQ5D1E8 599 aaKnown RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 DPY19L2P1Q6NXN4 242 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 SCD5Q86SK9 330 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 FAM131BQ86XD5 332 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 MCOLN2Q8IZK6 566 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 PAF1Q8N7H5 531 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 IRGQQ8WZA9 623 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 DDX1Q92499 740 aaKnown RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 IRF7Q92985 503 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 DNAJC7Q99615 494 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 RPP25Q9BUL9 199 aaKnown RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 KIF9Q9HAQ2 790 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 PLK2Q9NYY3 685 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 IGSF9Q9P2J2 1179 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 EPN1Q9Y6I3 576 aaPredicted RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 DOCK6Q96HP0 2047 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 TCF20Q9UGU0 1960 aaKnown RBP7.31□□□□□ -1.24
CDC7-203ENST00000428239 SPOPO43791 374 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 GPD1P21695 349 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 CDC25BP30305 580 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 GALCP54803 685 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 GPC5P78333 572 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 ZP2Q05996 745 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 ZNF268Q14587 947 aaPredicted RBP7.31□□□□□ -1.24
CDC7-203ENST00000428239 MESDQ14696 234 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 PKDCCQ504Y2 493 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 ARHGAP29Q52LW3 1261 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 PRSS36Q5K4E3 855 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 SYPL2Q5VXT5 272 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 RWDD4Q6NW29 188 aaKnown RBP7.31□□□□□ -1.24
CDC7-203ENST00000428239 XYLT1Q86Y38 959 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 RNF135Q8IUD6 432 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 NAT16Q8N8M0 369 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 E2F7Q96AV8 911 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 NUP85Q9BW27 656 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 THAP2Q9H0W7 228 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 WDCPQ9H6R7 721 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 PRKAG3Q9UGI9 489 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 NDRG2Q9UN36 371 aaKnown RBP7.31□□□□□ -1.24
CDC7-203ENST00000428239 SSU72P8A0A1W2PR75 194 aa7.31□□□□□ -1.24
CDC7-203ENST00000428239 SRGAP2O75044 1071 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms