RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 XAB2Q9HCS7 855 aaKnown RBP20.88■□□□□ 0.93
PMPCB-202ENST00000428154 ARHGEF3Q9NR81 526 aa20.88■□□□□ 0.93
PMPCB-202ENST00000428154 SMIM28A0A1B0GU29 152 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 HAS3O00219 553 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 DYNC1LI2O43237 492 aaPredicted RBP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 HNRNPCL1O60812 293 aaKnown RBP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 HUS1O60921 280 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 KRT37O76014 449 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 GNAT1P11488 350 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 WARSP23381 471 aaKnown RBP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 PRKCHP24723 683 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 CPT1AP50416 773 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 YWHAZP63104 245 aaKnown RBP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 FAM47EQ6ZV65 393 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 NPLOC4Q8TAT6 608 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 KBTBD7Q8WVZ9 684 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 C18orf25Q96B23 403 aaPredicted RBP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 APOPT1Q96IL0 206 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 QKIQ96PU8 341 aaKnown RBP eCLIP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 AP4E1Q9UPM8 1137 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 NME7Q9Y5B8 376 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 SF3B1O75533 1304 aaKnown RBP eCLIP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 FDFT1P37268 417 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 RASSF2P50749 326 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 CRYBB1P53674 252 aaPredicted RBP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 SNX17Q15036 470 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 ASRGL1Q7L266 308 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 LRRC6Q86X45 466 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 TRIM42Q8IWZ5 723 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 C7orf31Q8N865 590 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 TCP10LQ8TDR4 215 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 RMDN2Q96LZ7 410 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 LRRC37BQ96QE4 947 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 RAB3IPQ96QF0 476 aaPredicted RBP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 TACO1Q9BSH4 297 aaKnown RBP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 NXF3Q9H4D5 531 aaKnown RBP20.87■□□□□ 0.93
PMPCB-202ENST00000428154 MKS1Q9NXB0 559 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 GINS2Q9Y248 185 aa20.87■□□□□ 0.93
PMPCB-202ENST00000428154 LPXNO60711 386 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 GABBR2O75899 941 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 UNC5CO95185 931 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 DHRS4L1P0CG22 281 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 MLNP12872 115 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 LRPAP1P30533 357 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 ARL4AP40617 200 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 MATKP42679 507 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 MAGEA3P43357 314 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 PSEN2P49810 448 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 EFTUD2Q15029 972 aaKnown RBP eCLIP20.86■□□□□ 0.935e-8■■■■□ 24.1
PMPCB-202ENST00000428154 KBTBD12Q3ZCT8 623 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 SPRYD7Q5W111 196 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 UPF1Q92900 1129 aaKnown RBP eCLIP20.86■□□□□ 0.93
PMPCB-202ENST00000428154 MRRFQ96E11 262 aaKnown RBP20.86■□□□□ 0.93
PMPCB-202ENST00000428154 HNRNPABQ99729 332 aaKnown RBP20.86■□□□□ 0.93
PMPCB-202ENST00000428154 DHX35Q9H5Z1 703 aaKnown RBP20.86■□□□□ 0.93
PMPCB-202ENST00000428154 GPATCH2LQ9NWQ4 482 aa20.86■□□□□ 0.93
PMPCB-202ENST00000428154 ZC3H7BQ9UGR2 993 aaKnown RBP20.86■□□□□ 0.93
PMPCB-202ENST00000428154 PIN4Q9Y237 131 aaKnown RBP20.86■□□□□ 0.93
PMPCB-202ENST00000428154 C2CD2LO14523 706 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 TGDSO95455 350 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 SNRPAP09012 282 aaKnown RBP20.85■□□□□ 0.93
PMPCB-202ENST00000428154 SERPINB9P50453 376 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 NEK3P51956 506 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 MGAT5Q09328 741 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 MAP2K5Q13163 448 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 CA9Q16790 459 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 SLC25A52Q3SY17 297 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 RAB6CQ53S08 254 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 PPP6R3Q5H9R7 873 aaPredicted RBP20.85■□□□□ 0.93
PMPCB-202ENST00000428154 MORN1Q5T089 497 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 PAXIP1Q6ZW49 1069 aaPredicted RBP20.85■□□□□ 0.93
PMPCB-202ENST00000428154 IGDCC3Q8IVU1 814 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 KCTD13Q8WZ19 329 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 TUBB6Q9BUF5 446 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 RAB6CQ9H0N0 254 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 CDHR5Q9HBB8 845 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 ETNK1Q9HBU6 452 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 POPDC2Q9HBU9 364 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 GRID1Q9ULK0 1009 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 CLEC11AQ9Y240 323 aa20.85■□□□□ 0.93
PMPCB-202ENST00000428154 DAB1O75553 588 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 STK10O94804 968 aaKnown RBP20.84■□□□□ 0.93
PMPCB-202ENST00000428154 ATP6V1G2O95670 118 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 CNTFP26441 200 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 AIF1P55008 147 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 TMEM62Q0P6H9 643 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 SEMA5AQ13591 1074 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 TBC1D1Q86TI0 1168 aaPredicted RBP20.84■□□□□ 0.93
PMPCB-202ENST00000428154 CAND1Q86VP6 1230 aaKnown RBP20.84■□□□□ 0.93
PMPCB-202ENST00000428154 CCNJLQ8IV13 435 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 C10orf82Q8WW14 230 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 INPP5DQ92835 1189 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 CSPG4P5Q96PW8 444 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 B3GNT5Q9BYG0 378 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 DPEP3Q9H4B8 488 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 MANSC1Q9H8J5 431 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 TTLL3Q9Y4R7 772 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 KLF11O14901 512 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 KRT38O76015 456 aa20.84■□□□□ 0.93
PMPCB-202ENST00000428154 APOEP02649 317 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms