RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 TUBP50607 506 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 YWHAZP63104 245 aaKnown RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 CCDC15Q0P6D6 951 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 IRAK1BP1Q5VVH5 260 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 TRIM69Q86WT6 500 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 CISHQ9NSE2 258 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 ZNHIT2Q9UHR6 403 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 MICAL2O94851 1124 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 TMEM253P0C7T8 217 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 YWHAQP27348 245 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 GUCA1AP43080 201 aaPredicted RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 SNRPFP62306 86 aaKnown RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 RNF44Q7L0R7 432 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 HELQQ8TDG4 1101 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 RXFP2Q8WXD0 754 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 RTFDC1Q9BY42 306 aaPredicted RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 H0YC42 278 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 OTUD4Q01804 1114 aaKnown RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 IL17RAQ96F46 866 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 DEFB118Q96PH6 123 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 ATP13A1Q9HD20 1204 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 OSGEPQ9NPF4 335 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 DNAJC16Q9Y2G8 782 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 EVPLLA8MZ36 301 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 FAM47E-STBD1D6RA91 191 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 SOAT2O75908 522 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 GRK3P35626 688 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 TBX4P57082 545 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 DNAJC3Q13217 504 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 CAPRIN2Q6IMN6 1127 aaKnown RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 PARGQ86W56 976 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 USP13Q92995 863 aaPredicted RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 TMEM176AQ96HP8 235 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 AASDHPPTQ9NRN7 309 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 TRBV23OR9-2A0A075B6M9 112 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 CYP11B2P19099 503 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 PSEN2P49810 448 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 SCNN1GP51170 649 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 ERVK-9P63128 1117 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 ERVK-24P63145 666 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 SHROOM1Q2M3G4 852 aaPredicted RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 CCNI2Q6ZMN8 369 aaPredicted RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 GFM2Q969S9 779 aaKnown RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 ERP27Q96DN0 273 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 SYT15Q9BQS2 421 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 PDGFCQ9NRA1 345 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 TMEM120BA0PK00 339 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 DDX3XO00571 662 aaKnown RBP eCLIP13.55□□□□□ -0.24
SPG11-202ENST00000427534 FOXP2O15409 715 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 GSNP06396 782 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 MRPL28Q13084 256 aaKnown RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 XRRA1Q6P2D8 792 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 CENPLQ8N0S6 344 aaPredicted RBP13.55□□□□□ -0.24
SPG11-202ENST00000427534 GAD1Q99259 594 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 MANSC1Q9H8J5 431 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 CRYL1Q9Y2S2 319 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 SPACA6W5XKT8 324 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 CHURC1-FNTBB4DL54 471 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 USP12O75317 370 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 ALDH5A1P51649 535 aaPredicted RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 UXS1Q8NBZ7 420 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 SYTL5Q8TDW5 730 aaPredicted RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 KRT84Q9NSB2 600 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 HSMCR30P0CW71 290 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 ITIH2P19823 946 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 GTF2E2P29084 291 aaKnown RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 FMO4P31512 558 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 NAMPTP43490 491 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 GEMP55040 296 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 TGFB2P61812 414 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 MED21Q13503 144 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 TEDDM1Q5T9Z0 273 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 DNAJC14Q6Y2X3 702 aaPredicted RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 ILDR2Q71H61 639 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 CALML6Q8TD86 181 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 ERGIC2Q96RQ1 377 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 BCL2L14Q9BZR8 327 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 VTI1BQ9UEU0 232 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 LNPEPQ9UIQ6 1025 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 COILP38432 576 aaPredicted RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 PLK1P53350 603 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 SFSWAPQ12872 951 aaKnown RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 FBXO47Q5MNV8 452 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 DDI2Q5TDH0 399 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 DENND1BQ6P3S1 775 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 GET4Q7L5D6 327 aaPredicted RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 TRAPPC5Q8IUR0 188 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 COLGALT1Q8NBJ5 622 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 VIPAS39Q9H9C1 493 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 MRPL40Q9NQ50 206 aaKnown RBP13.54□□□□□ -0.24
SPG11-202ENST00000427534 ANKEF1Q9NU02 776 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 RBM22Q9NW64 420 aaKnown RBP eCLIP13.54□□□□□ -0.248e-7■■■■■ 35
SPG11-202ENST00000427534 KLHL3Q9UH77 587 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 PCDHB5Q9Y5E4 795 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 USP32Q8NFA0 1604 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 AGTP01019 485 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 FYNP06241 537 aa13.54□□□□□ -0.24
SPG11-202ENST00000427534 CYP2F1P24903 491 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms