RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 GIT1Q9Y2X7 761 aa14.55□□□□□ -0.08
APOBEC3D-202ENST00000427494 ADAMTS4O75173 837 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 ASGR1P07306 291 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 VIMP08670 466 aaKnown RBP14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 ZFXP17010 805 aaPredicted RBP14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 SSTR1P30872 391 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 MAP3K7CLP57077 242 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 MRPS5P82675 430 aaKnown RBP14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 KCNJ11Q14654 390 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 SLC25A52Q3SY17 297 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 DCAF6Q58WW2 860 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 AGMOQ6ZNB7 445 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 PAXIP1Q6ZW49 1069 aaPredicted RBP14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 FAM131BQ86XD5 332 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 CDKL3Q8IVW4 592 aaPredicted RBP14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 TMEM86AQ8N2M4 240 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 LRRN4Q8WUT4 740 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 KCTD13Q8WZ19 329 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 OSBPL7Q9BZF2 842 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 PPCSQ9HAB8 311 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 CRTAC1Q9NQ79 661 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 RAB6BQ9NRW1 208 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 SLC24A2Q9UI40 661 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 TIMM13Q9Y5L4 95 aaPredicted RBP14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 SYNJ2BP-COX16A0A087WUM0 186 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 CASTOR2A6NHX0 329 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 CHADO15335 359 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 CD52P31358 61 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 LHX1P48742 406 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 NDUFV1P49821 464 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 YWHAZP63104 245 aaKnown RBP14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 NKX3-2P78367 333 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 IFT88Q13099 833 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 MPP2Q14168 576 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 EFTUD2Q15029 972 aaKnown RBP eCLIP14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 KCNA10Q16322 511 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 EFHC2Q5JST6 749 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 PPP1R21Q6ZMI0 780 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 RPAINQ86UA6 219 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 TRABD2AQ86V40 505 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 PALM2Q8IXS6 379 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 PYROXD2Q8N2H3 581 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 C3orf58Q8NDZ4 430 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 GDAP1Q8TB36 358 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 CSPG4P5Q96PW8 444 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 NKIRAS1Q9NYS0 192 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 COX16Q9P0S2 106 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 PSMC3IPQ9P2W1 217 aaPredicted RBP14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 RABGEF1Q9UJ41 708 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 FZD10Q9ULW2 581 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 CHMP2BQ9UQN3 213 aa14.54□□□□□ -0.08
APOBEC3D-202ENST00000427494 RPLP2P05387 115 aaKnown RBP14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 GHRP10912 638 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 KRT15P19012 456 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 CCND3P30281 292 aaPredicted RBP14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 NOS2P35228 1153 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 TKTL1P51854 596 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 RABGGTBP53611 331 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 GEMIN4P57678 1058 aaKnown RBP14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 GBE1Q04446 702 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 PKN2Q16513 984 aaKnown RBP14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 RNF187Q5TA31 235 aaPredicted RBP14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 C3orf62Q6ZUJ4 267 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 MRPL10Q7Z7H8 261 aaKnown RBP14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 FAM35AQ86V20 835 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 OTUD6BQ8N6M0 293 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 RNF169Q8NCN4 708 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 CABS1Q96KC9 395 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 NSRP1Q9H0G5 558 aaKnown RBP14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 PADI3Q9ULW8 664 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 MGEA5O60502 916 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 AP1G2O75843 785 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 GOT1P17174 413 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 ARL4AP40617 200 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 ELK3P41970 407 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 NR2C2P49116 596 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 PITX1P78337 314 aaPredicted RBP14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 SLC10A2Q12908 348 aaPredicted RBP14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 KLHL38Q2WGJ6 581 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 FAXCQ5TGI0 409 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 OTUD1Q5VV17 481 aaPredicted RBP14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 C6orf89Q6UWU4 347 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 CCDC110Q8TBZ0 833 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 FBF1Q8TES7 1133 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 KLC2Q9H0B6 622 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 TRABDQ9H4I3 376 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 ETNK2Q9NVF9 386 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 STAP1Q9ULZ2 295 aa14.53□□□□□ -0.08
APOBEC3D-202ENST00000427494 PCNTO95613 3336 aa14.52□□□□□ -0.08
APOBEC3D-202ENST00000427494 CASP8AP2Q9UKL3 1982 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 MYBPHLA2RUH7 354 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 TCP11X1B4DZS4 312 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 TSHRP16473 764 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 ATP2A2P16615 1042 aaKnown RBP14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 AMPD1P23109 780 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 STX2P32856 288 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 RPL9P32969 192 aaKnown RBP14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 XRCC4Q13426 336 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 SLC45A4Q5BKX6 768 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 NCBP2-AS2Q69YL0 99 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms