RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 MIGA2Q7L4E1 593 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 GLCCI1Q86VQ1 547 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 AGBL3Q8NEM8 1001 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 RILPL2Q969X0 211 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 TMEM125Q96AQ2 219 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 SEC62Q99442 399 aaKnown RBP6.39□□□□□ -1.39
C9orf3-205ENST00000427193 GDF15Q99988 308 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 FSD1Q9BTV5 496 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 MXD3Q9BW11 206 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 TLR10Q9BXR5 811 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 IL17RBQ9NRM6 502 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 SCAF8Q9UPN6 1271 aaKnown RBP6.39□□□□□ -1.39
C9orf3-205ENST00000427193 ZMYM6O95789 1325 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 MYO3BQ8WXR4 1341 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 BDP1A6H8Y1 2624 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 GRM6O15303 877 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 IDH1O75874 414 aaKnown RBP6.38□□□□□ -1.39
C9orf3-205ENST00000427193 AGFG2O95081 481 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 GRIA3P42263 894 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 MAPK10P53779 464 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 FPGSQ05932 587 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 ZNF844Q08AG5 666 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 NECTIN1Q15223 517 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 VPS53Q5VIR6 699 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 GIMAP6Q6P9H5 292 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 CWC27Q6UX04 472 aaKnown RBP6.38□□□□□ -1.39
C9orf3-205ENST00000427193 ZNF788Q6ZQV5 615 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 RSPH3Q86UC2 560 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 MAGEB6Q8N7X4 407 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 SARAFQ96BY9 339 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 FBXL20Q96IG2 436 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 GUCD1Q96NT3 240 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.38□□□□□ -1.39
C9orf3-205ENST00000427193 TMX1Q9H3N1 280 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 TDP1Q9NUW8 608 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 CDYLQ9Y232 598 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 MROH7-TTC4A0A0A0MT08 1334 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 CCDC171Q6TFL3 1326 aa6.38□□□□□ -1.39
C9orf3-205ENST00000427193 KAT6AQ92794 2004 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 MYO5AQ9Y4I1 1855 aaKnown RBP6.37□□□□□ -1.39
C9orf3-205ENST00000427193 GPAA1O43292 621 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 HSPD1P10809 573 aaKnown RBP6.37□□□□□ -1.39
C9orf3-205ENST00000427193 GPD1P21695 349 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 HSPA4P34932 840 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 CHAF1AQ13111 956 aaPredicted RBP6.37□□□□□ -1.39
C9orf3-205ENST00000427193 TARDBPQ13148 414 aaKnown RBP eCLIP6.37□□□□□ -1.39
C9orf3-205ENST00000427193 PTPRRQ15256 657 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 UTP14CQ5TAP6 766 aaKnown RBP6.37□□□□□ -1.39
C9orf3-205ENST00000427193 NAA16Q6N069 864 aaPredicted RBP6.37□□□□□ -1.39
C9orf3-205ENST00000427193 ARMC9Q7Z3E5 817 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 PEG10Q86TG7 708 aaKnown RBP6.37□□□□□ -1.39
C9orf3-205ENST00000427193 SH2D3CQ8N5H7 860 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 PPM1NQ8N819 430 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 IL17RDQ8NFM7 739 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 ATL2Q8NHH9 583 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 TMX3Q96JJ7 454 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 PGBD1Q96JS3 809 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 IDI2Q9BXS1 227 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 MYOZ2Q9NPC6 264 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 DIAPH3Q9NSV4 1193 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 JKAMPQ9P055 326 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 CTTNBP2NLQ9P2B4 639 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 ABCF2Q9UG63 623 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 CDH23Q9H251 3354 aa6.37□□□□□ -1.39
C9orf3-205ENST00000427193 MAST2Q6P0Q8 1798 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 SGTAO43765 313 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 WDHD1O75717 1129 aaPredicted RBP6.36□□□□□ -1.39
C9orf3-205ENST00000427193 MBD4O95243 580 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 FGAP02671 866 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 GJB1P08034 283 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 ANXA11P50995 505 aaKnown RBP6.36□□□□□ -1.39
C9orf3-205ENST00000427193 PRMT2P55345 433 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 PROK1P58294 105 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 GSTO1P78417 241 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 DYRK1AQ13627 763 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 FKBP1CQ5VVH2 108 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 CDC42EP5Q6NZY7 148 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 CCDC129Q6ZRS4 1044 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 CERS3Q8IU89 383 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 SLC30A5Q8TAD4 765 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 IFI44Q8TCB0 444 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 RUFY2Q8WXA3 655 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 TFAP2BQ92481 460 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 HDAC10Q969S8 669 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 PACSIN1Q9BY11 444 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 CPNE5Q9HCH3 593 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 RAI14Q9P0K7 980 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 ANAPC4Q9UJX5 808 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 PRKAB1Q9Y478 270 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 PCDHAC2Q9Y5I4 1007 aa6.36□□□□□ -1.39
C9orf3-205ENST00000427193 COL2A1P02458 1487 aaPredicted RBP6.35□□□□□ -1.39
C9orf3-205ENST00000427193 ROBO3Q96MS0 1386 aa6.35□□□□□ -1.39
C9orf3-205ENST00000427193 CCDC195A0A1B0GUA6 201 aa6.35□□□□□ -1.39
C9orf3-205ENST00000427193 DNAJC9-AS1A6NH13 148 aa6.35□□□□□ -1.39
C9orf3-205ENST00000427193 CGB1A6NKQ9 187 aa6.35□□□□□ -1.39
C9orf3-205ENST00000427193 PRKAB2O43741 272 aa6.35□□□□□ -1.39
C9orf3-205ENST00000427193 SLC43A1O75387 559 aa6.35□□□□□ -1.39
C9orf3-205ENST00000427193 FRAT2O75474 233 aaPredicted RBP6.35□□□□□ -1.39
C9orf3-205ENST00000427193 REC8O95072 547 aa6.35□□□□□ -1.39
C9orf3-205ENST00000427193 LDHCP07864 332 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms