RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 MRPL44Q9H9J2 332 aaKnown RBP15.03■□□□□ -0
HDAC6-206ENST00000426196 FTSJ1Q9UET6 329 aa15.03■□□□□ -0
HDAC6-206ENST00000426196 STON1Q9Y6Q2 735 aa15.03■□□□□ -0
HDAC6-206ENST00000426196 GOLGA8IPA6NC78 632 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 GOLGA8JA6NMD2 632 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 KCNJ18B7U540 433 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 NPC1O15118 1278 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 PPP1R37O75864 691 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 JUPP14923 745 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 GNL1P36915 607 aaPredicted RBP15.02■□□□□ -0
HDAC6-206ENST00000426196 GOLGA8FQ08AF8 430 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 GOLGA8DPQ0D2H9 430 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 SF3A1Q15459 793 aaKnown RBP15.02■□□□□ -0
HDAC6-206ENST00000426196 KIF19Q2TAC6 998 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 L1TD1Q5T7N2 865 aaKnown RBP15.02■□□□□ -0
HDAC6-206ENST00000426196 SNX30Q5VWJ9 437 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 MCTP1Q6DN14 999 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 TPGS1Q6ZTW0 290 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 SYCP3Q8IZU3 236 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 PRCCQ92733 491 aaPredicted RBP15.02■□□□□ -0
HDAC6-206ENST00000426196 PCED1AQ9H1Q7 454 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 TMEM30AQ9NV96 361 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 INTS13Q9NVM9 706 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 MARK1Q9P0L2 795 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 SEL1LQ9UBV2 794 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 CHORDC1Q9UHD1 332 aaPredicted RBP15.02■□□□□ -0
HDAC6-206ENST00000426196 LSM7Q9UK45 103 aaKnown RBP15.02■□□□□ -0
HDAC6-206ENST00000426196 SNX11Q9Y5W9 270 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 AK5Q9Y6K8 562 aa15.02■□□□□ -0
HDAC6-206ENST00000426196 COL5A1P20908 1838 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-206ENST00000426196 ATP8B3O60423 1300 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 PTPRJQ12913 1337 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 TLX3O43711 291 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-206ENST00000426196 PCDHGA12O60330 932 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 SYNCRIPO60506 623 aaKnown RBP15.01□□□□□ -0.01
HDAC6-206ENST00000426196 PTPN1P18031 435 aaKnown RBP15.01□□□□□ -0.01
HDAC6-206ENST00000426196 KCNA1Q09470 495 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 HTR3DQ70Z44 454 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 TMPRSS6Q8IU80 811 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 OR6B3Q8NGW1 331 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 C1orf216Q8TAB5 229 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 IGSF8Q969P0 613 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 WBP2Q969T9 261 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 MRPL45Q9BRJ2 306 aaKnown RBP15.01□□□□□ -0.01
HDAC6-206ENST00000426196 GMIPQ9P107 970 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 ANKRD6Q9Y2G4 727 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 PCDHGA1Q9Y5H4 931 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 PTPN13Q12923 2485 aa15.01□□□□□ -0.01
HDAC6-206ENST00000426196 CLDN5O00501 218 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 TLR5O60602 858 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 TACC1O75410 805 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 PRPF6O94906 941 aaKnown RBP15□□□□□ -0.01
HDAC6-206ENST00000426196 IGLV3-19P01714 112 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 GRIA4P48058 902 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 SLC5A3P53794 718 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 ORC1Q13415 861 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 E2F5Q15329 346 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 SURF1Q15526 300 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 DUOXA2Q1HG44 320 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 OR5B17Q8NGF7 314 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 SCAMP5Q8TAC9 235 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 SNIP1Q8TAD8 396 aaKnown RBP15□□□□□ -0.01
HDAC6-206ENST00000426196 UCMAQ8WVF2 138 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 BHMTQ93088 406 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 CBWD1Q9BRT8 395 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 STRA6Q9BX79 667 aa15□□□□□ -0.01
HDAC6-206ENST00000426196 GCNT3O95395 438 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 CISD3P0C7P0 127 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 CDK4P11802 303 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 GAP43P17677 238 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 IL12RB1P42701 662 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 CDH8P55286 799 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 TAF1BQ53T94 588 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-206ENST00000426196 DYMQ7RTS9 669 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 CACUL1Q86Y37 369 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 GPD1LQ8N335 351 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 B3GALNT2Q8NCR0 500 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 B3GNT5Q9BYG0 378 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 TRIM9Q9C026 710 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 DPEP3Q9H4B8 488 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 PCIF1Q9H4Z3 704 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 CLMPQ9H6B4 373 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 COMMD8Q9NX08 183 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 TBC1D7Q9P0N9 293 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 KIF3AQ9Y496 699 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 PCDHB13Q9Y5F0 798 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 COL12A1Q99715 3063 aa14.99□□□□□ -0.01
HDAC6-206ENST00000426196 A8MXQ7 604 aa14.98□□□□□ -0.01
HDAC6-206ENST00000426196 ERVH48-1M5A8F1 160 aa14.98□□□□□ -0.01
HDAC6-206ENST00000426196 FAM163BP0C2L3 166 aa14.98□□□□□ -0.01
HDAC6-206ENST00000426196 ZDHHC11BP0C7U3 371 aa14.98□□□□□ -0.01
HDAC6-206ENST00000426196 TNNC1P63316 161 aa14.98□□□□□ -0.01
HDAC6-206ENST00000426196 ALCAMQ13740 583 aa14.98□□□□□ -0.01
HDAC6-206ENST00000426196 ADAT2Q7Z6V5 191 aaKnown RBP14.98□□□□□ -0.01
HDAC6-206ENST00000426196 FAM124AQ86V42 546 aa14.98□□□□□ -0.01
HDAC6-206ENST00000426196 ZSCAN31Q96LW9 406 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-206ENST00000426196 KCNK16Q96T55 309 aa14.98□□□□□ -0.01
HDAC6-206ENST00000426196 MED10Q9BTT4 135 aa14.98□□□□□ -0.01
HDAC6-206ENST00000426196 NRSN2Q9GZP1 204 aa14.98□□□□□ -0.01
HDAC6-206ENST00000426196 TM9SF3Q9HD45 589 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms