RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 DEC1Q9P2X7 70 aa13.9□□□□□ -0.18
CCDC12-202ENST00000425441 CHORDC1Q9UHD1 332 aaPredicted RBP13.9□□□□□ -0.18
CCDC12-202ENST00000425441 PLXND1Q9Y4D7 1925 aa13.9□□□□□ -0.18
CCDC12-202ENST00000425441 TCRBV21S2A2A0A5A6 115 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 FAM92AA1XBS5 289 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 TBC1D3BA6NDS4 549 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 PATE3B3GLJ2 98 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 CETN3O15182 167 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 TULP3O75386 442 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 AP1G2O75843 785 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 PROS1P07225 676 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 ZDHHC11BP0C7U3 371 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 HNRNPLP14866 589 aaKnown RBP eCLIP13.89□□□□□ -0.193e-8■■■■■ 39.8
CCDC12-202ENST00000425441 HOXD12P35452 270 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 IRX4P78413 519 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 FKBP3Q00688 224 aaKnown RBP13.89□□□□□ -0.19
CCDC12-202ENST00000425441 ADAM9Q13443 819 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 NCOA4Q13772 614 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 ANO4Q32M45 955 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 ANO6Q4KMQ2 910 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 TRIM61Q5EBN2 209 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 EMC10Q5UCC4 262 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 LYSMD4Q5XG99 296 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 SLC36A4Q6YBV0 504 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 SYT12Q8IV01 421 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 ETFBKMTQ8IXQ9 262 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 FAM186BQ8IYM0 893 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 ZNF513Q8N8E2 541 aaPredicted RBP13.89□□□□□ -0.19
CCDC12-202ENST00000425441 PARD3BQ8TEW8 1205 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 HMGB4Q8WW32 186 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 TAF4BQ92750 862 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 EEF2KMTQ96G04 330 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 ZFRQ96KR1 1074 aaKnown RBP13.89□□□□□ -0.19
CCDC12-202ENST00000425441 XPO6Q96QU8 1125 aaKnown RBP13.89□□□□□ -0.19
CCDC12-202ENST00000425441 MED15Q96RN5 788 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 GZF1Q9H116 711 aaPredicted RBP13.89□□□□□ -0.19
CCDC12-202ENST00000425441 SLC32A1Q9H598 525 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 SMYD3Q9H7B4 428 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 KRT82Q9NSB4 513 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 LSM7Q9UK45 103 aaKnown RBP13.89□□□□□ -0.19
CCDC12-202ENST00000425441 FRMD4BQ9Y2L6 1034 aa13.89□□□□□ -0.19
CCDC12-202ENST00000425441 TNRC6BQ9UPQ9 1833 aaKnown RBP13.89□□□□□ -0.19
CCDC12-202ENST00000425441 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 ANTXRLA6NF34 631 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 LRRIQ3A6PVS8 624 aaPredicted RBP13.88□□□□□ -0.19
CCDC12-202ENST00000425441 CDX4O14627 284 aaPredicted RBP13.88□□□□□ -0.19
CCDC12-202ENST00000425441 MAPK13O15264 365 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 SLC16A3O15427 465 aaKnown RBP13.88□□□□□ -0.19
CCDC12-202ENST00000425441 AP5Z1O43299 807 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 ADAM23O75077 832 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 C4BPAP04003 597 aaKnown RBP13.88□□□□□ -0.19
CCDC12-202ENST00000425441 EPB41P11171 864 aaKnown RBP13.88□□□□□ -0.19
CCDC12-202ENST00000425441 ERCC5P28715 1186 aaPredicted RBP13.88□□□□□ -0.19
CCDC12-202ENST00000425441 CDH8P55286 799 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 CLDN10P78369 228 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 FOXC1Q12948 553 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 SGSM1Q2NKQ1 1148 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 MAP7D1Q3KQU3 841 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 UAP1L1Q3KQV9 507 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 CT47A1Q5JQC4 288 aaPredicted RBP13.88□□□□□ -0.19
CCDC12-202ENST00000425441 C10orf76Q5T2E6 689 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 GRAMD4Q6IC98 578 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 SDE2Q6IQ49 451 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 SCARA5Q6ZMJ2 495 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 PAQR9Q6ZVX9 377 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 RABEPKQ7Z6M1 372 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 UNC93AQ86WB7 457 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 BBS7Q8IWZ6 715 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 TMEFF1Q8IYR6 380 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 PHTF2Q8N3S3 785 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 NAT16Q8N8M0 369 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 TERB1Q8NA31 727 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 SCAMP5Q8TAC9 235 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 CEP76Q8TAP6 659 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 RLN3Q8WXF3 142 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 CEP63Q96MT8 703 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 DNAI2Q9GZS0 605 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 CCSER2Q9H7U1 834 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 TLR8Q9NR97 1041 aaKnown RBP13.88□□□□□ -0.19
CCDC12-202ENST00000425441 GMIPQ9P107 970 aa13.88□□□□□ -0.19
CCDC12-202ENST00000425441 GIPC1O14908 333 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 TLR5O60602 858 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 IRF1P10914 325 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 HOXB2P14652 356 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 NTSR1P30989 418 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 PSMC2P35998 433 aaKnown RBP13.87□□□□□ -0.19
CCDC12-202ENST00000425441 ATXN3P54252 364 aaPredicted RBP13.87□□□□□ -0.19
CCDC12-202ENST00000425441 MESP2Q0VG99 397 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
CCDC12-202ENST00000425441 PEAR1Q5VY43 1037 aaPredicted RBP13.87□□□□□ -0.19
CCDC12-202ENST00000425441 SLC23A3Q6PIS1 610 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 UNQ6494/PRO21346Q6UXR6 183 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 ARMCX6Q7L4S7 300 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 ACOT1Q86TX2 421 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 SFTPA1Q8IWL2 248 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 FUKQ8N0W3 1084 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 CRYBG2Q8N1P7 616 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 PLEKHO2Q8TD55 490 aa13.87□□□□□ -0.19
CCDC12-202ENST00000425441 KCTD12Q96CX2 325 aaKnown RBP13.87□□□□□ -0.19
CCDC12-202ENST00000425441 CSNK1G1Q9HCP0 422 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms