RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SMG8Q8ND04 991 aaKnown RBP11.37□□□□□ -0.59
DDX56-203ENST00000421223 LRRC8CQ8TDW0 803 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 CCT6BQ92526 530 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 KCNK16Q96T55 309 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.37□□□□□ -0.59
DDX56-203ENST00000421223 CNTN3Q9P232 1028 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 LGALS13Q9UHV8 139 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 CDY2AQ9Y6F7 541 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 PIRO00625 290 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 MT-ND3P03897 115 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 ABHD2P08910 425 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 ARL4AP40617 200 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 MNAT1P51948 309 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 CDC42EP1Q00587 391 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 OVGP1Q12889 678 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 SLC10A2Q12908 348 aaPredicted RBP11.36□□□□□ -0.59
DDX56-203ENST00000421223 SPARCL1Q14515 664 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 SV2CQ496J9 727 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 PKDCCQ504Y2 493 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 DENND5BQ6ZUT9 1274 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 PRPF39Q86UA1 669 aaKnown RBP11.36□□□□□ -0.59
DDX56-203ENST00000421223 FAM228AQ86W67 206 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 UNC93AQ86WB7 457 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 KIF2BQ8N4N8 673 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 TNIP3Q96KP6 325 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 PAAF1Q9BRP4 392 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 RHOBTB2Q9BYZ6 727 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 USP29Q9HBJ7 922 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 DDX43Q9NXZ2 648 aaKnown RBP11.36□□□□□ -0.59
DDX56-203ENST00000421223 ZC3H7BQ9UGR2 993 aaKnown RBP11.36□□□□□ -0.59
DDX56-203ENST00000421223 ST3GAL5Q9UNP4 418 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 PLXNA1Q9UIW2 1896 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 TCRBV9S1A1TA0A576 114 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 MBLAC1A4D2B0 266 aaPredicted RBP11.36□□□□□ -0.59
DDX56-203ENST00000421223 TCEA3O75764 348 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 POMCP01189 267 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 TAC1P20366 129 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 ADRA1DP25100 572 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 L1CAMP32004 1257 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 FAAP100Q0VG06 881 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 MORN1Q5T089 497 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 SYPL2Q5VXT5 272 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 HFE2Q6ZVN8 426 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 EDEM1Q92611 657 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 KCTD15Q96SI1 283 aaPredicted RBP11.36□□□□□ -0.59
DDX56-203ENST00000421223 SLC13A1Q9BZW2 595 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 KLC2Q9H0B6 622 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 KRT82Q9NSB4 513 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 KLHL14Q9P2G3 628 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 DCTN4Q9UJW0 460 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 PLXNB2O15031 1838 aa11.36□□□□□ -0.59
DDX56-203ENST00000421223 METTL18O95568 372 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 PTPN1P18031 435 aaKnown RBP11.35□□□□□ -0.59
DDX56-203ENST00000421223 SCNN1GP51170 649 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 CRYBB1P53674 252 aaPredicted RBP11.35□□□□□ -0.59
DDX56-203ENST00000421223 IRX4P78413 519 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 PTK7Q13308 1070 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 BMPR2Q13873 1038 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 TAZQ16635 292 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 NBPF20Q3BBV1 942 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 HEATR6Q6AI08 1181 aaKnown RBP11.35□□□□□ -0.59
DDX56-203ENST00000421223 ALKAL1Q6UXT8 129 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 RELL1Q8IUW5 271 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 FUKQ8N0W3 1084 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 SLC7A14Q8TBB6 771 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 TTC17Q96AE7 1141 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 FAXDC2Q96IV6 333 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 CYTH2Q99418 400 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
DDX56-203ENST00000421223 SLC40A1Q9NP59 571 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 PAK5Q9P286 719 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 SLC17A7Q9P2U7 560 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 GRID1Q9ULK0 1009 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 STK38LQ9Y2H1 464 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 DERAQ9Y315 318 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 PTGESO14684 152 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
DDX56-203ENST00000421223 HOXD8P13378 290 aaPredicted RBP11.35□□□□□ -0.59
DDX56-203ENST00000421223 RGS2P41220 211 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 CLCNKBP51801 687 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 TKTL1P51854 596 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 SESN2P58004 480 aaPredicted RBP11.35□□□□□ -0.59
DDX56-203ENST00000421223 TP53INP2Q8IXH6 220 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 TCP10LQ8TDR4 215 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 SENP8Q96LD8 212 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 RMDN2Q96LZ7 410 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 MAGEB18Q96M61 343 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 AGAP3Q96P47 875 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 CSPG4P5Q96PW8 444 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 ARHGAP39Q9C0H5 1083 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 MYBPHLA2RUH7 354 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 UGT1A9O60656 530 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 SETSIPP0DME0 302 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 GNAT1P11488 350 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 FKBP1BP68106 108 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 KLHL38Q2WGJ6 581 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 VPS52Q8N1B4 723 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 RIBC1Q8N443 379 aaPredicted RBP11.35□□□□□ -0.59
DDX56-203ENST00000421223 WNT8BQ93098 351 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 SGSM3Q96HU1 749 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms