RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TM9SF1O15321 606 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 NCAM2O15394 837 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 KCNN4O15554 427 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 TMEM63AO94886 807 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SUN1O94901 812 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ODC1P11926 461 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 MLNP12872 115 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 KRT15P19012 456 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 LMO2P25791 158 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 FDFT1P37268 417 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SCAPQ12770 1279 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SPARCL1Q14515 664 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 MAPRE1Q15691 268 aaKnown RBP15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 KCTD19Q17RG1 926 aaPredicted RBP15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 LACTB2Q53H82 288 aaPredicted RBP15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SH3PXD2AQ5TCZ1 1133 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PAXIP1Q6ZW49 1069 aaPredicted RBP15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 BEND5Q7L4P6 421 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CCNJLQ8IV13 435 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 FBXO36Q8NEA4 188 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 IRGQQ8WZA9 623 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 BRD8Q9H0E9 1235 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 KCNK9Q9NPC2 374 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 EIF2B3Q9NR50 452 aaKnown RBP15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 RABGEF1Q9UJ41 708 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ST3GAL5Q9UNP4 418 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 TEX264Q9Y6I9 313 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 IKBKGQ9Y6K9 419 aa15.1■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PATJQ8NI35 1801 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 F9P00740 461 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 VIMP08670 466 aaKnown RBP15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PDGFRBP09619 1106 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 LCP1P13796 627 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 MGAT3Q09327 533 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ADIGQ0VDE8 80 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 MMRN1Q13201 1228 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 NBPF20Q3BBV1 942 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 HEATR6Q6AI08 1181 aaKnown RBP15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 C3orf62Q6ZUJ4 267 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CYS1Q717R9 158 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ZC3H18Q86VM9 953 aaKnown RBP15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SMARCD1Q96GM5 515 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SENP8Q96LD8 212 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PWWP2AQ96N64 755 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 OLFM3Q96PB7 478 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CSPG4P5Q96PW8 444 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 NPY6RQ99463 290 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CXCL16Q9H2A7 254 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 TRABDQ9H4I3 376 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 DHX35Q9H5Z1 703 aaKnown RBP15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CTNNAL1Q9UBT7 734 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ZNF180Q9UJW8 692 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PPP1R12AO14974 1030 aaPredicted RBP15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 INPPL1O15357 1258 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 MTSS1O43312 755 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 OPHN1O60890 802 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 GABBR2O75899 941 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CYP11A1P05108 521 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 GCAP28676 217 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 MSH2P43246 934 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 HCAR3P49019 387 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SULT1E1P49888 294 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ZNF200P98182 395 aaPredicted RBP15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SLC20A2Q08357 652 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ADCY1Q08828 1119 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 GRIK3Q13003 919 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 FASTKD3Q14CZ7 662 aaKnown RBP15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PPP6R3Q5H9R7 873 aaPredicted RBP15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 INTS6LQ5JSJ4 861 aaKnown RBP15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 LGSNQ5TDP6 509 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CLEC20AQ6ZU45 233 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PRUNE1Q86TP1 453 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 TMEM130Q8N3G9 435 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ARRDC4Q8NCT1 418 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 WNT8BQ93098 351 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PAFAH2Q99487 392 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SYT15Q9BQS2 421 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 B3GNT5Q9BYG0 378 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 RAB6BQ9NRW1 208 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ETNK2Q9NVF9 386 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 DDX43Q9NXZ2 648 aaKnown RBP15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 FZD10Q9ULW2 581 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 HEY1Q9Y5J3 304 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 USP3Q9Y6I4 520 aa15.09■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PIK3R2O00459 728 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 SNX3O60493 162 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 ADAMTS4O75173 837 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 MLH1P40692 756 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 GPX6P59796 221 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 IFT88Q13099 833 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 SEMA5AQ13591 1074 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 PDK1Q15118 436 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 ARL13BQ3SXY8 428 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 RAB41Q5JT25 222 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 ANKRD22Q5VYY1 191 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 OSTM1Q86WC4 334 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 METTL23Q86XA0 190 aa15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 TFB1MQ8WVM0 346 aaKnown RBP15.08■□□□□ 0
HLA-DPA1-242ENST00000419277 FAM149B1Q96BN6 582 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms