RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CCDC73Q6ZRK6 1079 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 CATIPQ7Z7H3 387 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 TMC8Q8IU68 726 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 APLFQ8IW19 511 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC103Q8IW40 242 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 SPACA3Q8IXA5 215 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 IQCF2Q8IXL9 164 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 FAM26EQ8N5C1 309 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 MINDY1Q8N5J2 469 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 DTNBP1Q96EV8 351 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 HERC2P3Q9BVR0 1158 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 APOL6Q9BWW8 343 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 FZD8Q9H461 694 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 ZNF287Q9HBT7 754 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 BATF3Q9NR55 127 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 PXMP2Q9NR77 195 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 TPSG1Q9NRR2 321 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 GPATCH2Q9NW75 528 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 GDE1Q9NZC3 331 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 PLEKHB1Q9UF11 243 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 RNF112Q9ULX5 631 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 NPFFR2Q9Y5X5 522 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 BAZ2AQ9UIF9 1905 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 ZMYM6O95789 1325 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 TCRBV5S4A2TA0A5A2 114 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 FAM149AA5PLN7 773 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 RRN3P2A6NIE6 340 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 EIF3CLB5ME19 914 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 EPB41L2O43491 1005 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 TGM5O43548 720 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 OPA1O60313 960 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 ATG13O75143 517 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 RTN2O75298 545 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 SOD2P04179 222 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 CFIP05156 583 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 PDGFRBP09619 1106 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 MYCLP12524 364 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 PLS3P13797 630 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 NAT1P18440 290 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 FCARP24071 287 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 MARK3P27448 753 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 GDI1P31150 447 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 DPP6P42658 865 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 SLC11A1P49279 550 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 GLUD2P49448 558 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 GSK3AP49840 483 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 SESN3P58005 492 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 SEMG2Q02383 582 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 GFPT1Q06210 699 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 SLC14A1Q13336 389 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 SART3Q15020 963 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 IQCB1Q15051 598 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 TTF1Q15361 905 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 USH1GQ495M9 461 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC178Q5BJE1 867 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 NAIF1Q69YI7 327 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 PKN3Q6P5Z2 889 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 NFXL1Q6ZNB6 911 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 TAX1BP1Q86VP1 789 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 PALB2Q86YC2 1186 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 TICAM1Q8IUC6 712 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 PPIL6Q8IXY8 311 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 ZNF444Q8N0Y2 327 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 ATL2Q8NHH9 583 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 BICD2Q8TD16 824 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 CSGALNACT1Q8TDX6 532 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 LEO1Q8WVC0 666 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 MAGEB10Q96LZ2 347 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 HSPA12BQ96MM6 686 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 EIF3CQ99613 913 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 C8orf33Q9H7E9 229 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 ZFP14Q9HCL3 533 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 SEMA3GQ9NS98 782 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 QPCTLQ9NXS2 382 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 ERAP1Q9NZ08 941 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 MCM8Q9UJA3 840 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 PCDHA9Q9Y5H5 950 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 PCDHA2Q9Y5H9 948 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 CACNA1EQ15878 2313 aa5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 ASCC3Q8N3C0 2202 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-206ENST00000417628 LAMA1P25391 3075 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 PTPRBP23467 1997 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 BICDL2A1A5D9 508 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 SLC38A8A6NNN8 435 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 WDR64B1ANS9 1081 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 H3BS24 57 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 PLK4O00444 970 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 ZNF263O14978 683 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 PRDM1O75626 825 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 SYPP08247 313 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 TSPY3P0CV98 308 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 TSPY8P0CW00 308 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 TNNT1P13805 278 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 TPP2P29144 1249 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 HOXA9P31269 272 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 IGFALSP35858 605 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 RAB27AP51159 221 aa5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 KPNA1P52294 538 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-206ENST00000417628 KCNMA1Q12791 1236 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms