RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SPOCD1Q6ZMY3 1216 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 FBXL13Q8NEE6 735 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 XAB2Q9HCS7 855 aaKnown RBP15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 AOC1P19801 751 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 CAP2P40123 477 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SOX10P56693 466 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SP4Q02446 784 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SLC18A2Q05940 514 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 MAMLD1Q13495 774 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SNRNP35Q16560 246 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 CCDC142Q17RM4 750 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SMTNL2Q2TAL5 461 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 OGFRL1Q5TC84 451 aaPredicted RBP15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 VWA5B1Q5TIE3 1220 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SLC15A3Q8IY34 581 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 RCOR2Q8IZ40 523 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 DAW1Q8N136 415 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 RNF169Q8NCN4 708 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 ACTL9Q8TC94 416 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 DDI1Q8WTU0 396 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 ACCSQ96QU6 501 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 NACC1Q96RE7 527 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 CAAP1Q9H8G2 361 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 HACL1Q9UJ83 578 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 PLLPQ9Y342 182 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 QSER1Q2KHR3 1735 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 UBE4BO95155 1302 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 MYPNQ86TC9 1320 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SH3PXD2BA1X283 911 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SDR42E2A6NKP2 422 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 F8VP50 259 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SLC16A4O15374 487 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 DENRO43583 198 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 MOXD1Q6UVY6 613 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SLC44A1Q8WWI5 657 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 ZNF512Q96ME7 567 aaPredicted RBP15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SNCAIPQ9Y6H5 919 aa15.22■□□□□ 0.03
NCKIPSD-204ENST00000416649 SIN3BO75182 1162 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 THRAP10827 490 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 RPL22P35268 128 aaKnown RBP15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 TGFB2P61812 414 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 CDKL1Q00532 357 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 OTUD4Q01804 1114 aaKnown RBP15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 PTP4A2Q12974 167 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 NRF1Q16656 503 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 PACS1Q6VY07 963 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 FRMD7Q6ZUT3 714 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 OTOP1Q7RTM1 612 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 AHI1Q8N157 1196 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 NDUFAF2Q8N183 169 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 CCDC33Q8N5R6 958 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 AGBL3Q8NEM8 1001 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 GRIN3AQ8TCU5 1115 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 PAIP1Q9H074 479 aaKnown RBP15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 BRD8Q9H0E9 1235 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 MRPL47Q9HD33 250 aaKnown RBP15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 GPRC5CQ9NQ84 441 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 FARP1Q9Y4F1 1045 aaPredicted RBP15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 STK24Q9Y6E0 443 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 KLF11O14901 512 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 ITM2AO43736 263 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 UGT1A9O60656 530 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 KRT37O76014 449 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 ITGAXP20702 1163 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 RELAQ04206 551 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 MROH9Q5TGP6 573 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 PADI6Q6TGC4 694 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 Q6ZNX1 250 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 PCGF5Q86SE9 256 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 ERI1Q8IV48 349 aaKnown RBP15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 FBXW8Q8N3Y1 598 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 FAM71DQ8N9W8 422 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 TSPAN14Q8NG11 270 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 DQX1Q8TE96 717 aaKnown RBP15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 RSPH1Q8WYR4 309 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 TRIM11Q96F44 468 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 LXNQ9BS40 222 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 DEFB129Q9H1M3 183 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 TMEM206Q9H813 350 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 UGT1A7Q9HAW7 530 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 UGT1A10Q9HAW8 530 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 UGT1A8Q9HAW9 530 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 PLGRKTQ9HBL7 147 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 TUFT1Q9NNX1 390 aa15.21■□□□□ 0.03
NCKIPSD-204ENST00000416649 ZNF541Q9H0D2 1346 aa15.21■□□□□ 0.02
NCKIPSD-204ENST00000416649 FBP2O00757 339 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 AIM2O14862 343 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 CFLARO15519 480 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 DCXO43602 365 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 SREBF1P36956 1147 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 MRPS5P82675 430 aaKnown RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 ATP1A4Q13733 1029 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 C16orf46Q6P387 395 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 DNAJC14Q6Y2X3 702 aaPredicted RBP15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 KBTBD6Q86V97 674 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 GMCL1P1Q8NEA9 526 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 ACTRT2Q8TDY3 377 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 GMCL1Q96IK5 515 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 TBCCD1Q9NVR7 557 aa15.2■□□□□ 0.02
NCKIPSD-204ENST00000416649 FETUBQ9UGM5 382 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms