RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 HOXD13P35453 343 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 GRIK2Q13002 908 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 SLC39A14Q15043 492 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 STK38Q15208 465 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 ACOT1Q86TX2 421 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 ZNF507Q8TCN5 953 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 WBP2Q969T9 261 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 USP28Q96RU2 1077 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 MIR1-1HGQ9H1L0 117 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 SLC6A17Q9H1V8 727 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 CUEDC2Q9H467 287 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 CD93Q9NPY3 652 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 IL37Q9NZH6 218 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 MARK1Q9P0L2 795 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 HCN2Q9UL51 889 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 GPSM3Q9Y4H4 160 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 GJB3O75712 270 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 CER1O95813 267 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 NCAM1P13591 858 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 CCDC130P13994 396 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 AP3M2P53677 418 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 MAP3K7CLP57077 242 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 TOGARAM2Q6ZUX3 1019 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 PAQR9Q6ZVX9 377 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 EPM2AIP1Q7L775 607 aaPredicted RBP10.58□□□□□ -0.72
MDC1-202ENST00000416571 PDZD3Q86UT5 571 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 FUKQ8N0W3 1084 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 ZCCHC9Q8N567 271 aaKnown RBP10.58□□□□□ -0.72
MDC1-202ENST00000416571 SLC2A14Q8TDB8 520 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 UCMAQ8WVF2 138 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 ZNF516Q92618 1163 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 BHMTQ93088 406 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 JAKMIP2Q96AA8 810 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 DHX58Q96C10 678 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 GPR174Q9BXC1 333 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 KLF16Q9BXK1 252 aaPredicted RBP10.58□□□□□ -0.72
MDC1-202ENST00000416571 XYLT2Q9H1B5 865 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 VRTNQ9H8Y1 702 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 PRDM16Q9HAZ2 1276 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 FAM49BQ9NUQ9 324 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 KBTBD4Q9NVX7 518 aa10.58□□□□□ -0.72
MDC1-202ENST00000416571 CGNQ9P2M7 1197 aaKnown RBP10.58□□□□□ -0.72
MDC1-202ENST00000416571 EIF4E1BA6NMX2 242 aaKnown RBP10.57□□□□□ -0.72
MDC1-202ENST00000416571 WASH3PC4AMC7 463 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 NPC1O15118 1278 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 SYNCRIPO60506 623 aaKnown RBP10.57□□□□□ -0.72
MDC1-202ENST00000416571 TBX18O95935 607 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 FAM200BP0CF97 657 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 ACADMP11310 421 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 SYT1P21579 422 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 ADORA2BP29275 332 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 OXTRP30559 389 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 MATKP42679 507 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 PLA2G4AP47712 749 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 CASP4P49662 377 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 ZNF132P52740 706 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 NCOA4Q13772 614 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 E2F5Q15329 346 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 COL28A1Q2UY09 1125 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 IL27RAQ6UWB1 636 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 CCNI2Q6ZMN8 369 aaPredicted RBP10.57□□□□□ -0.72
MDC1-202ENST00000416571 TADA2BQ86TJ2 420 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 METTL3Q86U44 580 aaKnown RBP10.57□□□□□ -0.72
MDC1-202ENST00000416571 IQUBQ8NA54 791 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 ZMIZ2Q8NF64 920 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 MDM1Q8TC05 714 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 TOE1Q96GM8 510 aaKnown RBP10.57□□□□□ -0.72
MDC1-202ENST00000416571 SMOQ99835 787 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 GAREM1Q9H706 876 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 CSNK1G1Q9HCP0 422 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 CD248Q9HCU0 757 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 CYLDQ9NQC7 956 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 WSB2Q9NYS7 404 aaPredicted RBP10.57□□□□□ -0.72
MDC1-202ENST00000416571 PLK2Q9NYY3 685 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 TFIP11Q9UBB9 837 aaKnown RBP10.57□□□□□ -0.72
MDC1-202ENST00000416571 DNMT3LQ9UJW3 386 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 PCOLCE2Q9UKZ9 415 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 NFE2L3Q9Y4A8 694 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 STON1Q9Y6Q2 735 aa10.57□□□□□ -0.72
MDC1-202ENST00000416571 MORC2Q9Y6X9 1032 aaPredicted RBP10.57□□□□□ -0.72
MDC1-202ENST00000416571 DMXL2Q8TDJ6 3036 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 BCAT2O15382 392 aaPredicted RBP10.56□□□□□ -0.72
MDC1-202ENST00000416571 CYP26A1O43174 497 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 GREM1O60565 184 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 BEST1O76090 585 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 CAPNS1P04632 268 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 RARGP13631 454 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 ACO1P21399 889 aaKnown RBP10.56□□□□□ -0.72
MDC1-202ENST00000416571 PGFP49763 221 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 NDST1P52848 882 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 ARID5AQ03989 594 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 ORC1Q13415 861 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 CUL4AQ13619 759 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 E2F4Q16254 413 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 FUT11Q495W5 492 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 C10orf120Q5SQS8 335 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 DCAF12L1Q5VU92 463 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 UNC13DQ70J99 1090 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 GLRX5Q86SX6 157 aa10.56□□□□□ -0.72
MDC1-202ENST00000416571 UNC93AQ86WB7 457 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms