RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 SRGAP2BP0DMP2 458 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 RARGP13631 454 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 PDGFRAP16234 1089 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 GPD1P21695 349 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 GABRR2P28476 465 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 CDC25CP30307 473 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 PITX1P78337 314 aaPredicted RBP13.88□□□□□ -0.19
CNN3-203ENST00000415017 IFRD2Q12894 506 aaPredicted RBP13.88□□□□□ -0.19
CNN3-203ENST00000415017 NNTQ13423 1086 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 SLC5A9Q2M3M2 681 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 BTBD8Q5XKL5 378 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 DCUN1D2Q6PH85 259 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 NYAP1Q6ZVC0 841 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 CYP4V2Q6ZWL3 525 aaPredicted RBP13.88□□□□□ -0.19
CNN3-203ENST00000415017 SHKBP1Q8TBC3 707 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 DQX1Q8TE96 717 aaKnown RBP13.88□□□□□ -0.19
CNN3-203ENST00000415017 MYLIPQ8WY64 445 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 SMG7Q92540 1137 aaKnown RBP13.88□□□□□ -0.19
CNN3-203ENST00000415017 CD101Q93033 1021 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 FAM149B1Q96BN6 582 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 FAM161BQ96MY7 647 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 CDK5RAP1Q96SZ6 601 aaKnown RBP13.88□□□□□ -0.19
CNN3-203ENST00000415017 CORO1BQ9BR76 489 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 LZTFL1Q9NQ48 299 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 OLA1Q9NTK5 396 aaKnown RBP13.88□□□□□ -0.19
CNN3-203ENST00000415017 TRMT1Q9NXH9 659 aaKnown RBP13.88□□□□□ -0.19
CNN3-203ENST00000415017 IP6K2Q9UHH9 426 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 ZMYM5Q9UJ78 669 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 MAGED2Q9UNF1 606 aaPredicted RBP13.88□□□□□ -0.19
CNN3-203ENST00000415017 PAXBP1Q9Y5B6 917 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 CAPN6Q9Y6Q1 641 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 CLUHO75153 1309 aa13.88□□□□□ -0.19
CNN3-203ENST00000415017 MYO1FO00160 1098 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 BUB1O43683 1085 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 MOCS3O95396 460 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 IGLV3-27P01718 113 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 NCAM1P13591 858 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 TFE3P19532 575 aaPredicted RBP13.87□□□□□ -0.19
CNN3-203ENST00000415017 DDX6P26196 483 aaKnown RBP eCLIP13.87□□□□□ -0.19
CNN3-203ENST00000415017 PCK1P35558 622 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 SLC1A1P43005 524 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 HDAC4P56524 1084 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 IFI16Q16666 785 aaKnown RBP13.87□□□□□ -0.19
CNN3-203ENST00000415017 ARHGAP29Q52LW3 1261 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 DCAF6Q58WW2 860 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 SH3PXD2AQ5TCZ1 1133 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 TMC5Q6UXY8 1006 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 GRASPQ7Z6J2 395 aaPredicted RBP13.87□□□□□ -0.19
CNN3-203ENST00000415017 MICALL1Q8N3F8 863 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 DEFB123Q8N688 67 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 SUSD6Q92537 303 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 EDEM1Q92611 657 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 TCEAL4Q96EI5 215 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 SLC39A13Q96H72 371 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 BTBD6Q96KE9 485 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 ZFRQ96KR1 1074 aaKnown RBP13.87□□□□□ -0.19
CNN3-203ENST00000415017 CFAP57Q96MR6 1250 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 TBCBQ99426 244 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 IRX2Q9BZI1 471 aaPredicted RBP13.87□□□□□ -0.19
CNN3-203ENST00000415017 RNF38Q9H0F5 515 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 CCSER2Q9H7U1 834 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 WDR6Q9NNW5 1121 aaKnown RBP13.87□□□□□ -0.19
CNN3-203ENST00000415017 STAP1Q9ULZ2 295 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 GUCA1BQ9UMX6 200 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 ALG6Q9Y672 507 aa13.87□□□□□ -0.19
CNN3-203ENST00000415017 DOCK4Q8N1I0 1966 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 MACROD2A1Z1Q3 448 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 C2orf78A6NCI8 922 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 ZNF197O14709 1029 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 IRAK2O43187 625 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 COCHO43405 550 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 TLR5O60602 858 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 LRCH4O75427 683 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 TRUB2O95900 331 aaKnown RBP13.86□□□□□ -0.19
CNN3-203ENST00000415017 TBX18O95935 607 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 RALAP11233 206 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 IGFBP4P22692 258 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 SDC4P31431 198 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 CXCR3P49682 368 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 RNASE9P60153 205 aaKnown RBP13.86□□□□□ -0.19
CNN3-203ENST00000415017 NTHL1P78549 312 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 SLC7A9P82251 487 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 TAF12Q16514 161 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 C15orf59Q2T9L4 293 aaPredicted RBP13.86□□□□□ -0.19
CNN3-203ENST00000415017 RAB6CQ53S08 254 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 RARS2Q5T160 578 aaKnown RBP13.86□□□□□ -0.19
CNN3-203ENST00000415017 HECTD3Q5T447 861 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 CPNE8Q86YQ8 564 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 C17orf53Q8N3J3 647 aaPredicted RBP13.86□□□□□ -0.19
CNN3-203ENST00000415017 SMRP1Q8NCR6 262 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 TRIM58Q8NG06 486 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 GOLGA1Q92805 767 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 SLC22A12Q96S37 553 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 NCAPGQ9BPX3 1015 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 SLC46A2Q9BY10 475 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 RAB6CQ9H0N0 254 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 PRUNE2Q8WUY3 3088 aa13.86□□□□□ -0.19
CNN3-203ENST00000415017 A0A1W2PRU2 124 aa13.85□□□□□ -0.19
CNN3-203ENST00000415017 GREM1O60565 184 aa13.85□□□□□ -0.19
CNN3-203ENST00000415017 PALMO75781 387 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms