RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TUFMP49411 452 aaKnown RBP16.21■□□□□ 0.19
SHMT2-202ENST00000414700 ZNF143P52747 638 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-202ENST00000414700 TAS2R40P59535 323 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 AMPD2Q01433 879 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 CREMQ03060 361 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 DCAF6Q58WW2 860 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 LILRA6Q6PI73 481 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 FNIP1Q8TF40 1166 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 HES6Q96HZ4 224 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 SPATA17Q96L03 361 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 SAMD11Q96NU1 681 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 OSER1Q9NX31 292 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 AMFRQ9UKV5 643 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 MAGED2Q9UNF1 606 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-202ENST00000414700 PER2O15055 1255 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 LRCH4O75427 683 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 LTFP02788 710 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 ATXN1P54253 815 aaKnown RBP16.21■□□□□ 0.18
SHMT2-202ENST00000414700 BSPRYQ5W0U4 402 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 PAPD7Q5XG87 772 aaKnown RBP16.21■□□□□ 0.18
SHMT2-202ENST00000414700 TXNRD3NBQ6F5E7 133 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 SCD5Q86SK9 330 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 TCEAL8Q8IYN2 117 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 NOA1Q8NC60 698 aaKnown RBP16.21■□□□□ 0.18
SHMT2-202ENST00000414700 ALG3Q92685 438 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 CALR3Q96L12 384 aaKnown RBP16.21■□□□□ 0.18
SHMT2-202ENST00000414700 POPDC2Q9HBU9 364 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 NGRNQ9NPE2 291 aaKnown RBP16.21■□□□□ 0.18
SHMT2-202ENST00000414700 IL37Q9NZH6 218 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 INSL5Q9Y5Q6 135 aa16.21■□□□□ 0.18
SHMT2-202ENST00000414700 SLC38A8A6NNN8 435 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 ZNF185O15231 689 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 ELF1P32519 619 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 MATKP42679 507 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 RPL10AP62906 217 aaKnown RBP16.2■□□□□ 0.18
SHMT2-202ENST00000414700 TWF1Q12792 350 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 PIGHQ14442 188 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-202ENST00000414700 DCAF12L1Q5VU92 463 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 OTUD1Q5VV17 481 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-202ENST00000414700 ADGRD2Q7Z7M1 963 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 NIPA2Q8N8Q9 360 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-202ENST00000414700 SLC7A14Q8TBB6 771 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 CNPY3Q9BT09 278 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 EMILIN2Q9BXX0 1053 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 DONSONQ9NYP3 566 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 GMIPQ9P107 970 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 NUDT5Q9UKK9 219 aa16.2■□□□□ 0.18
SHMT2-202ENST00000414700 COL4A4P53420 1690 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-202ENST00000414700 A0A1W2PQH9 124 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 FAM92AA1XBS5 289 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 DDX3YO15523 660 aaKnown RBP16.19■□□□□ 0.18
SHMT2-202ENST00000414700 KIF1CO43896 1103 aaKnown RBP16.19■□□□□ 0.18
SHMT2-202ENST00000414700 NCAM1P13591 858 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 SDC4P31431 198 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 SSR1P43307 286 aaKnown RBP16.19■□□□□ 0.18
SHMT2-202ENST00000414700 CLCN4P51793 760 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 TAF10Q12962 218 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 ATP13A4Q4VNC1 1196 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 ARCQ7LC44 396 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 RBM23Q86U06 439 aaKnown RBP16.19■□□□□ 0.18
SHMT2-202ENST00000414700 SCML4Q8N228 414 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 ADAM32Q8TC27 787 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 COG1Q8WTW3 980 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 TIFAQ96CG3 184 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 SLC2A13Q96QE2 648 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 TBCBQ99426 244 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 DDX23Q9BUQ8 820 aaKnown RBP16.19■□□□□ 0.18
SHMT2-202ENST00000414700 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.19■□□□□ 0.18
SHMT2-202ENST00000414700 HSFX1Q9UBD0 423 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 FBXW11Q9UKB1 542 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 SNX12Q9UMY4 172 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 SCML2Q9UQR0 700 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 EBAG9O00559 213 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 DAB1O75553 588 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 GLUD1P00367 558 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 GLI1P08151 1106 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 HMGA1P17096 107 aaKnown RBP16.19■□□□□ 0.18
SHMT2-202ENST00000414700 YWHAQP27348 245 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 IL1R2P27930 398 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 HNRNPH1P31943 449 aaKnown RBP16.19■□□□□ 0.18
SHMT2-202ENST00000414700 GJC1P36383 396 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 ALDH1A3P47895 512 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 LIG3P49916 1009 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 YWHAGP61981 247 aaKnown RBP eCLIP16.19■□□□□ 0.18
SHMT2-202ENST00000414700 RPS6KA1Q15418 735 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 KREMEN2Q8NCW0 462 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 FAM172AQ8WUF8 416 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 IRGQQ8WZA9 623 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 ACSF2Q96CM8 615 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-202ENST00000414700 OSBPL9Q96SU4 736 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 FBXO44Q9H4M3 255 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 FAM169AQ9Y6X4 670 aa16.19■□□□□ 0.18
SHMT2-202ENST00000414700 PRRC2BQ5JSZ5 2229 aaKnown RBP16.18■□□□□ 0.18
SHMT2-202ENST00000414700 DPYSL4O14531 572 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 CAPN9O14815 690 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 SART1O43290 800 aaKnown RBP16.18■□□□□ 0.18
SHMT2-202ENST00000414700 MAN1A1P33908 653 aa16.18■□□□□ 0.18
SHMT2-202ENST00000414700 CTNNA1P35221 906 aaKnown RBP16.18■□□□□ 0.18
SHMT2-202ENST00000414700 SLC1A1P43005 524 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms