RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 SMNDC1O75940 238 aaKnown RBP eCLIP15.53■□□□□ 0.08
TTC39A-208ENST00000413473 METTL18O95568 372 aa15.53■□□□□ 0.08
TTC39A-208ENST00000413473 CSH1P0DML2 217 aa15.53■□□□□ 0.08
TTC39A-208ENST00000413473 CSH2P0DML3 217 aa15.53■□□□□ 0.08
TTC39A-208ENST00000413473 KPNB1Q14974 876 aaKnown RBP15.53■□□□□ 0.08
TTC39A-208ENST00000413473 FAM187BQ17R55 369 aa15.53■□□□□ 0.08
TTC39A-208ENST00000413473 HSF5Q4G112 596 aaPredicted RBP15.53■□□□□ 0.08
TTC39A-208ENST00000413473 ACSBG2Q5FVE4 666 aa15.53■□□□□ 0.08
TTC39A-208ENST00000413473 TRMT10BQ6PF06 316 aaKnown RBP15.53■□□□□ 0.08
TTC39A-208ENST00000413473 OLFML1Q6UWY5 402 aa15.53■□□□□ 0.08
TTC39A-208ENST00000413473 CCDC33Q8N5R6 958 aa15.53■□□□□ 0.08
TTC39A-208ENST00000413473 E2F7Q96AV8 911 aa15.53■□□□□ 0.08
TTC39A-208ENST00000413473 SPDL1Q96EA4 605 aa15.53■□□□□ 0.08
TTC39A-208ENST00000413473 PTPRFP10586 1907 aa15.53■□□□□ 0.08
TTC39A-208ENST00000413473 MYO18AQ92614 2054 aaKnown RBP15.53■□□□□ 0.08
TTC39A-208ENST00000413473 CES4AQ5XG92 561 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.52■□□□□ 0.08
TTC39A-208ENST00000413473 TEKT4Q8WW24 435 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 B3GNT5Q9BYG0 378 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.52■□□□□ 0.08
TTC39A-208ENST00000413473 AKT3Q9Y243 479 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 CCDC195A0A1B0GUA6 201 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 VTNP04004 478 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 ATP6V1C1P21283 382 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 MAGEA6P43360 314 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 CPA2P48052 419 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 SLC6A3Q01959 620 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 CHI3L2Q15782 390 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 CCDC6Q16204 474 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 MROH9Q5TGP6 573 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 ACOT1Q86TX2 421 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 TTC30AQ86WT1 665 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 ARID3BQ8IVW6 561 aaPredicted RBP15.52■□□□□ 0.08
TTC39A-208ENST00000413473 SIGLEC10Q96LC7 697 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 MAGEB5Q9BZ81 275 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 FAM49BQ9NUQ9 324 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 ERAP1Q9NZ08 941 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 ITGA11Q9UKX5 1188 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 CSADQ9Y600 493 aa15.52■□□□□ 0.08
TTC39A-208ENST00000413473 DPYSL4O14531 572 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 KRT36O76013 467 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 KRT38O76015 456 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 RARBP10826 455 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 TFE3P19532 575 aaPredicted RBP15.52■□□□□ 0.07
TTC39A-208ENST00000413473 HDAC4P56524 1084 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 GBE1Q04446 702 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 RCN1Q15293 331 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 ANO7Q6IWH7 933 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 NUDCD3Q8IVD9 361 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 MPP5Q8N3R9 675 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 MCUQ8NE86 351 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 WDR60Q8WVS4 1066 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 DNAJC9Q8WXX5 260 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 C7orf26Q96N11 449 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 ACAP3Q96P50 834 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 TBCBQ99426 244 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 NRDE2Q9H7Z3 1164 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 PCMTD2Q9NV79 361 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 KCNK4Q9NYG8 393 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 STOML1Q9UBI4 398 aa15.52■□□□□ 0.07
TTC39A-208ENST00000413473 HMX2A2RU54 273 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 LIN7AO14910 233 aaPredicted RBP15.51■□□□□ 0.07
TTC39A-208ENST00000413473 PAPSS1O43252 624 aaPredicted RBP15.51■□□□□ 0.07
TTC39A-208ENST00000413473 NEBLO76041 1014 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 SLC25A27O95847 323 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 KITP10721 976 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 CYP2F1P24903 491 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 GRIA1P42261 906 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 SLC10A2Q12908 348 aaPredicted RBP15.51■□□□□ 0.07
TTC39A-208ENST00000413473 KCTD2Q14681 263 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 GJC2Q5T442 439 aaPredicted RBP15.51■□□□□ 0.07
TTC39A-208ENST00000413473 ATG16L1Q676U5 607 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 CAPRIN2Q6IMN6 1127 aaKnown RBP15.51■□□□□ 0.07
TTC39A-208ENST00000413473 ZNF534Q76KX8 674 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 TRIM42Q8IWZ5 723 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 NDUFAF2Q8N183 169 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 LRRC39Q96DD0 335 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 SIRPGQ9P1W8 387 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 MARCOQ9UEW3 520 aaPredicted RBP15.51■□□□□ 0.07
TTC39A-208ENST00000413473 CORO1CQ9ULV4 474 aaPredicted RBP15.51■□□□□ 0.07
TTC39A-208ENST00000413473 SCN1AP35498 2009 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 B2RBV5 119 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 GABBR2O75899 941 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 POU5F1BQ06416 359 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 TREML1Q86YW5 311 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 TEX9Q8N6V9 391 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 KIF12Q96FN5 646 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 EBNA1BP2Q99848 306 aaKnown RBP15.51■□□□□ 0.07
TTC39A-208ENST00000413473 MRPL45Q9BRJ2 306 aaKnown RBP15.51■□□□□ 0.07
TTC39A-208ENST00000413473 ZNF670Q9BS34 389 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 OSBPL1AQ9BXW6 950 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 SLC4A5Q9BY07 1137 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 ARHGEF4Q9NR80 690 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 RBPJLQ9UBG7 517 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 PPARGC1AQ9UBK2 798 aaKnown RBP15.51■□□□□ 0.07
TTC39A-208ENST00000413473 C2CD2Q9Y426 696 aa15.51■□□□□ 0.07
TTC39A-208ENST00000413473 PCNTO95613 3336 aa15.5■□□□□ 0.07
TTC39A-208ENST00000413473 LTBP3Q9NS15 1303 aa15.5■□□□□ 0.07
TTC39A-208ENST00000413473 MDM4O15151 490 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms