RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 KCNK5O95279 499 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 KLKB1P03952 638 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 TYRP14679 529 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 GABRG2P18507 467 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 RPL13P26373 211 aaKnown RBP20.24■□□□□ 0.83
CPSF7-204ENST00000413232 PMLP29590 882 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 ENPEPQ07075 957 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 Q6ZNB5 142 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 ARMCX6Q7L4S7 300 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 CYP2U1Q7Z449 544 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 C11orf74Q86VG3 221 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 PIGKQ92643 395 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 BBS2Q9BXC9 721 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 SCAND2PQ9GZW5 306 aaPredicted RBP20.24■□□□□ 0.83
CPSF7-204ENST00000413232 CD248Q9HCU0 757 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 PNPLA8Q9NP80 782 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 DNAJC17Q9NVM6 304 aaKnown RBP20.24■□□□□ 0.83
CPSF7-204ENST00000413232 BCCIPQ9P287 314 aaKnown RBP eCLIP20.24■□□□□ 0.83
CPSF7-204ENST00000413232 STARD13Q9Y3M8 1113 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 PCDHA5Q9Y5H7 936 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 USP24Q9UPU5 2620 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 A0A1W2PQF6 199 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 CACNG3O60359 315 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 STC2O76061 302 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 CISD3P0C7P0 127 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 RAD23BP54727 409 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 PNOCQ13519 176 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 C10orf120Q5SQS8 335 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 KRT39Q6A163 491 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 KLHDC10Q6PID8 442 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 PGBD3Q8N328 593 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 SLC4A11Q8NBS3 891 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 BHMTQ93088 406 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 PLK2Q9NYY3 685 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 MARK1Q9P0L2 795 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 DNMT3LQ9UJW3 386 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 NAGPAQ9UK23 515 aa20.23■□□□□ 0.83
CPSF7-204ENST00000413232 KHNYNO15037 678 aaKnown RBP20.22■□□□□ 0.83
CPSF7-204ENST00000413232 GTF2H1P32780 548 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 PRCPP42785 496 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 PLA2G4AP47712 749 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 EDRF1Q3B7T1 1238 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 GRAMD4Q6IC98 578 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 PSAPL1Q6NUJ1 521 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 KIAA1211LQ6NV74 962 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 CCDC186Q7Z3E2 898 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 DEFB119Q8N690 84 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 KCNV2Q8TDN2 545 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 HEXIM2Q96MH2 286 aaKnown RBP20.22■□□□□ 0.83
CPSF7-204ENST00000413232 CISHQ9NSE2 258 aa20.22■□□□□ 0.83
CPSF7-204ENST00000413232 HOXB2P14652 356 aa20.21■□□□□ 0.83
CPSF7-204ENST00000413232 NTSR1P30989 418 aa20.21■□□□□ 0.83
CPSF7-204ENST00000413232 MXI1P50539 228 aa20.21■□□□□ 0.83
CPSF7-204ENST00000413232 PMS1P54277 932 aaKnown RBP20.21■□□□□ 0.83
CPSF7-204ENST00000413232 CBWD6Q4V339 395 aa20.21■□□□□ 0.83
CPSF7-204ENST00000413232 CBWD3Q5JTY5 395 aa20.21■□□□□ 0.83
CPSF7-204ENST00000413232 CBWD5Q5RIA9 395 aa20.21■□□□□ 0.83
CPSF7-204ENST00000413232 LPCAT2Q7L5N7 544 aa20.21■□□□□ 0.83
CPSF7-204ENST00000413232 FBXL13Q8NEE6 735 aa20.21■□□□□ 0.83
CPSF7-204ENST00000413232 ERCC4Q92889 916 aaPredicted RBP20.21■□□□□ 0.83
CPSF7-204ENST00000413232 CD93Q9NPY3 652 aa20.21■□□□□ 0.83
CPSF7-204ENST00000413232 RAB20Q9NX57 234 aa20.21■□□□□ 0.83
CPSF7-204ENST00000413232 ATXN2Q99700 1313 aaKnown RBP20.21■□□□□ 0.83
CPSF7-204ENST00000413232 CEP295Q9C0D2 2601 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 WASH3PC4AMC7 463 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 TULP2O00295 520 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 MAP3K13O43283 966 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 PIGZQ86VD9 579 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 FMR1NBQ8N0W7 255 aaPredicted RBP20.2■□□□□ 0.82
CPSF7-204ENST00000413232 ZNF276Q8N554 614 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 NDRG1Q92597 394 aaKnown RBP20.2■□□□□ 0.82
CPSF7-204ENST00000413232 TMEM176AQ96HP8 235 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 SPACA7Q96KW9 195 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 XPO6Q96QU8 1125 aaKnown RBP20.2■□□□□ 0.82
CPSF7-204ENST00000413232 SLC6A17Q9H1V8 727 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 CALCOCO1Q9P1Z2 691 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 WDR35Q9P2L0 1181 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 LSM7Q9UK45 103 aaKnown RBP20.2■□□□□ 0.82
CPSF7-204ENST00000413232 FBXO10Q9UK96 956 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 RAD54BQ9Y620 910 aa20.2■□□□□ 0.82
CPSF7-204ENST00000413232 HMBSP08397 361 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 TRIM21P19474 475 aaKnown RBP20.19■□□□□ 0.82
CPSF7-204ENST00000413232 ITPKAP23677 461 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 GOLGA8FQ08AF8 430 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 GOLGA8DPQ0D2H9 430 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 PREPLQ4J6C6 727 aaPredicted RBP20.19■□□□□ 0.82
CPSF7-204ENST00000413232 TRIM61Q5EBN2 209 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 RAB41Q5JT25 222 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 TRMT11Q7Z4G4 463 aaKnown RBP20.19■□□□□ 0.82
CPSF7-204ENST00000413232 CHPFQ8IZ52 775 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 CCDC150Q8NCX0 1101 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 IPO4Q8TEX9 1081 aaKnown RBP20.19■□□□□ 0.82
CPSF7-204ENST00000413232 TMEM9BQ9NQ34 198 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 FSCN3Q9NQT6 498 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 CACNA2D2Q9NY47 1150 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 CLIC5Q9NZA1 410 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 ATP6V1DQ9Y5K8 247 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 PCDH15Q96QU1 1955 aa20.19■□□□□ 0.82
CPSF7-204ENST00000413232 CFAP47Q6ZTR5 3102 aa20.18■□□□□ 0.82
CPSF7-204ENST00000413232 CETN3O15182 167 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 221.6 ms