RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 RINLQ6ZS11 566 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 TAS1R1Q7RTX1 841 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 GSPT2Q8IYD1 628 aaKnown RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SLC39A11Q8N1S5 342 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 TTC13Q8NBP0 860 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 KCTD6Q8NC69 237 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SLC35B2Q8TB61 432 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SPPL2BQ8TCT7 592 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ATG4AQ8WYN0 398 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 PIK3R5Q8WYR1 880 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 HSPH1Q92598 858 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 NTAN1Q96AB6 310 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 PAIP2Q9BPZ3 127 aaKnown RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 HERC2P3Q9BVR0 1158 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 FAM129AQ9BZQ8 928 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 MCOLN1Q9GZU1 580 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 PRDM5Q9NQX1 630 aaPredicted RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 RCOR3Q9P2K3 495 aaPredicted RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 FZD10Q9ULW2 581 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 DRG1Q9Y295 367 aaKnown RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 UTP11Q9Y3A2 253 aaKnown RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 NT5C1B-RDH14C9J2C7 533 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 APOC4-APOC2K7ER74 178 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SASH3O75995 380 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 UPP2O95045 317 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ECEL1O95672 775 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 APOC2P02655 101 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 LAG3P18627 525 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 L1CAMP32004 1257 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 GBP1P32455 592 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ALDH7A1P49419 539 aaKnown RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ATXN1P54253 815 aaKnown RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 CDH6P55285 790 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 TRADDQ15628 312 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 CA9Q16790 459 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 USP41Q3LFD5 358 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 DCAF6Q58WW2 860 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 KCNT2Q6UVM3 1135 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 C16orf59Q7L2K0 433 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 MREGQ8N565 214 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 CCDC185Q8N715 623 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ATL2Q8NHH9 583 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ITFG2Q969R8 447 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 FAM149B1Q96BN6 582 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SPATA17Q96L03 361 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 B3GALT6Q96L58 329 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 CEP295NLQ96MC4 621 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 WDR6Q9NNW5 1121 aaKnown RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ZDHHC18Q9NUE0 388 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 COMMD8Q9NX08 183 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 GRHL1Q9NZI5 618 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 AP4E1Q9UPM8 1137 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 NAALADL1Q9UQQ1 740 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SCML2Q9UQR0 700 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 HELZP42694 1942 aaKnown RBP5.74□□□□□ -1.49
EPHA4-202ENST00000409854 SOD2P04179 222 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 ITGAVP06756 1048 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 LINC00271P0C7V0 271 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 HAPLN1P10915 354 aaPredicted RBP5.74□□□□□ -1.49
EPHA4-202ENST00000409854 GRIK1P39086 918 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 KCNJ1P48048 391 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 VCPP55072 806 aaKnown RBP5.74□□□□□ -1.49
EPHA4-202ENST00000409854 HTRA4P83105 476 aaPredicted RBP5.74□□□□□ -1.49
EPHA4-202ENST00000409854 LMNB2Q03252 620 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 LLGL1Q15334 1064 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 ODF2Q5BJF6 829 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 ZC3H12AQ5D1E8 599 aaKnown RBP5.74□□□□□ -1.49
EPHA4-202ENST00000409854 KAZNQ674X7 775 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 CEP57Q86XR8 500 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 MAP7D3Q8IWC1 876 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 CCDC105Q8IYK2 499 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 GPR65Q8IYL9 337 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 PQLC3Q8N755 202 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 COLGALT1Q8NBJ5 622 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 SCAMP5Q8TAC9 235 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 ZNF558Q96NG5 402 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 RNF157Q96PX1 679 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 NEUROG2Q9H2A3 272 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 VIPAS39Q9H9C1 493 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 PIGVQ9NUD9 493 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 ABI2Q9NYB9 513 aaPredicted RBP5.74□□□□□ -1.49
EPHA4-202ENST00000409854 HSFX1Q9UBD0 423 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 NFU1Q9UMS0 254 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 MRPL42Q9Y6G3 142 aaKnown RBP5.74□□□□□ -1.49
EPHA4-202ENST00000409854 M0QYT0 321 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 TP73O15350 636 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 DAPK3O43293 454 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 CST8O60676 142 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 TGM2P21980 687 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 IVDP26440 423 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 KLRC2P26717 231 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 RPL21P46778 160 aaKnown RBP5.74□□□□□ -1.49
EPHA4-202ENST00000409854 CXCR3P49682 368 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 CDR1P51861 262 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 DSG1Q02413 1049 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 KRT17Q04695 432 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 MMRN1Q13201 1228 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 SEMA3BQ13214 749 aa5.74□□□□□ -1.49
EPHA4-202ENST00000409854 PPIGQ13427 754 aaKnown RBP eCLIP5.74□□□□□ -1.49
EPHA4-202ENST00000409854 BYSLQ13895 437 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms