RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ARL14EPQ8N8R7 260 aaPredicted RBP17.38■□□□□ 0.37
SUMO1-208ENST00000409627 TDRD5Q8NAT2 981 aaKnown RBP17.38■□□□□ 0.37
SUMO1-208ENST00000409627 ZSCAN18Q8TBC5 510 aaPredicted RBP17.38■□□□□ 0.37
SUMO1-208ENST00000409627 RNF139Q8WU17 664 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 CTNNBL1Q8WYA6 563 aaPredicted RBP17.38■□□□□ 0.37
SUMO1-208ENST00000409627 ACSF2Q96CM8 615 aaPredicted RBP17.38■□□□□ 0.37
SUMO1-208ENST00000409627 ZSWIM3Q96MP5 696 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 SLC22A12Q96S37 553 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 PACSIN1Q9BY11 444 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 RNF38Q9H0F5 515 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 EPS15L1Q9UBC2 864 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 DNMT3LQ9UJW3 386 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 NAALADL1Q9UQQ1 740 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 NR2E1Q9Y466 385 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 CYP1A2P05177 515 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 NOS2P35228 1153 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 MATKP42679 507 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 MAGEA1P43355 309 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 DCAF6Q58WW2 860 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 SYPL2Q5VXT5 272 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 ASB16Q96NS5 453 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 CYP2S1Q96SQ9 504 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 NACA2Q9H009 215 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 SMOC2Q9H3U7 446 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 TRPV4Q9HBA0 871 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 MRPL47Q9HD33 250 aaKnown RBP17.37■□□□□ 0.37
SUMO1-208ENST00000409627 RRN3Q9NYV6 651 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.37■□□□□ 0.37
SUMO1-208ENST00000409627 MYO1AQ9UBC5 1043 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 NUDT5Q9UKK9 219 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 ARHGAP26Q9UNA1 814 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 PCDHA13Q9Y5I0 950 aa17.37■□□□□ 0.37
SUMO1-208ENST00000409627 KIF26AQ9ULI4 1882 aaPredicted RBP17.36■□□□□ 0.37
SUMO1-208ENST00000409627 GJB6O95452 261 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 TBX18O95935 607 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 MBL2P11226 248 aaPredicted RBP17.36■□□□□ 0.37
SUMO1-208ENST00000409627 TCF3P15923 654 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 FLT3P36888 993 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 KCNQ1P51787 676 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 RNASE9P60153 205 aaKnown RBP17.36■□□□□ 0.37
SUMO1-208ENST00000409627 EFEMP1Q12805 493 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 FAM78AQ5JUQ0 283 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 TRNP1Q6NT89 227 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 JOSD2Q8TAC2 188 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 DQX1Q8TE96 717 aaKnown RBP17.36■□□□□ 0.37
SUMO1-208ENST00000409627 SMARCD2Q92925 531 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 ARHGEF26Q96DR7 871 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 MCEEQ96PE7 176 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 DDX23Q9BUQ8 820 aaKnown RBP17.36■□□□□ 0.37
SUMO1-208ENST00000409627 KIF9Q9HAQ2 790 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 MARCH2Q9P0N8 246 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 PRKAG3Q9UGI9 489 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 RASAL2Q9UJF2 1139 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 STAP1Q9ULZ2 295 aa17.36■□□□□ 0.37
SUMO1-208ENST00000409627 REXO2Q9Y3B8 237 aaKnown RBP17.36■□□□□ 0.37
SUMO1-208ENST00000409627 C2CD4BA6NLJ0 364 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 C2CD4DB7Z1M9 353 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 DPYSL4O14531 572 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 MDM4O15151 490 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 PRAMEF12O95522 483 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 IGLV3-25P01717 112 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 RFC1P35251 1148 aaPredicted RBP17.35■□□□□ 0.37
SUMO1-208ENST00000409627 RPL7AP62424 266 aaKnown RBP17.35■□□□□ 0.37
SUMO1-208ENST00000409627 KRT83P78385 493 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 NNTQ13423 1086 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 DCUN1D2Q6PH85 259 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 DDX42Q86XP3 938 aaKnown RBP eCLIP17.35■□□□□ 0.37
SUMO1-208ENST00000409627 ARID3BQ8IVW6 561 aaPredicted RBP17.35■□□□□ 0.37
SUMO1-208ENST00000409627 ZDHHC14Q8IZN3 488 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 PLCD3Q8N3E9 789 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 EMC1Q8N766 993 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 ACRBPQ8NEB7 543 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 USP13Q92995 863 aaPredicted RBP17.35■□□□□ 0.37
SUMO1-208ENST00000409627 NT5C3BQ969T7 300 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 ZFRQ96KR1 1074 aaKnown RBP17.35■□□□□ 0.37
SUMO1-208ENST00000409627 SERPINB11Q96P15 392 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 NPY6RQ99463 290 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 KLF16Q9BXK1 252 aaPredicted RBP17.35■□□□□ 0.37
SUMO1-208ENST00000409627 TDP1Q9NUW8 608 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 OBP2AQ9NY56 170 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 UVRAGQ9P2Y5 699 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 SFMBT1Q9UHJ3 866 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 CPQQ9Y646 472 aa17.35■□□□□ 0.37
SUMO1-208ENST00000409627 TMEM191CA6NGB0 347 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 GPD1P21695 349 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 SP100P23497 879 aaPredicted RBP17.34■□□□□ 0.37
SUMO1-208ENST00000409627 FCARP24071 287 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 SDC4P31431 198 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 PTPN9P43378 593 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 KPNA1P52294 538 aaPredicted RBP17.34■□□□□ 0.37
SUMO1-208ENST00000409627 VAV2P52735 878 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 COG7P83436 770 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 USP4Q13107 963 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 SLC25A52Q3SY17 297 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 MTSS1LQ765P7 747 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 TAC4Q86UU9 113 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 MIB1Q86YT6 1006 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 ADHFE1Q8IWW8 467 aa17.34■□□□□ 0.37
SUMO1-208ENST00000409627 CELF5Q8N6W0 485 aaKnown RBP17.34■□□□□ 0.37
SUMO1-208ENST00000409627 FNIP1Q8TF40 1166 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms