RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TUBB2BQ9BVA1 445 aa13.46□□□□□ -0.25
CHRNA1-205ENST00000409542 NUSAP1Q9BXS6 441 aaKnown RBP13.46□□□□□ -0.25
CHRNA1-205ENST00000409542 MTMR12Q9C0I1 747 aa13.46□□□□□ -0.25
CHRNA1-205ENST00000409542 PCIF1Q9H4Z3 704 aa13.46□□□□□ -0.25
CHRNA1-205ENST00000409542 SMPD4Q9NXE4 827 aa13.46□□□□□ -0.25
CHRNA1-205ENST00000409542 RBAKQ9NYW8 714 aaPredicted RBP13.46□□□□□ -0.25
CHRNA1-205ENST00000409542 LHX6Q9UPM6 363 aa13.46□□□□□ -0.25
CHRNA1-205ENST00000409542 PTPRJQ12913 1337 aa13.46□□□□□ -0.25
CHRNA1-205ENST00000409542 FASNP49327 2511 aaKnown RBP13.46□□□□□ -0.26
CHRNA1-205ENST00000409542 CEP192Q8TEP8 1941 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 ZNF840PA6NDX5 716 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 EFCAB8A8MWE9 144 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 KAT7O95251 611 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 PDGFRBP09619 1106 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 H2AFXP16104 143 aaPredicted RBP13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 ABCD1P33897 745 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 GRIK1P39086 918 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 LHX1P48742 406 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 CACNA2D1P54289 1103 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 SLC7A9P82251 487 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 KDSRQ06136 332 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 LMAN2Q12907 356 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 STK4Q13043 487 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 SEMA3BQ13214 749 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 ACAP1Q15027 740 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 SLC23A3Q6PIS1 610 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 SYT12Q8IV01 421 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 MNS1Q8NEH6 495 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 OR5B17Q8NGF7 314 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 OR2I1PQ8NGU4 316 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 CCDC26Q8TAB7 109 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 HMGB4Q8WW32 186 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 DNAJC19Q96DA6 116 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 PNKPQ96T60 521 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 DNAJC7Q99615 494 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 SYT15Q9BQS2 421 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 NUP58Q9BVL2 599 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 TMEM30AQ9NV96 361 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 OGFRQ9NZT2 677 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 PILRBQ9UKJ0 227 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 HCN2Q9UL51 889 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 CAPN11Q9UMQ6 739 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 MSRB2Q9Y3D2 182 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 NEUROG3Q9Y4Z2 214 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 MRFAP1Q9Y605 127 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 CPQQ9Y646 472 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 V9GYY5 206 aaPredicted RBP13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 PLXND1Q9Y4D7 1925 aa13.45□□□□□ -0.26
CHRNA1-205ENST00000409542 ITPR1Q14643 2758 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 A0A0A0MRY4 1105 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 MYMKA6NI61 221 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 MAP3K13O43283 966 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 KIF5CO60282 957 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 ALDH1A2O94788 518 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 OLFM2O95897 454 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 CAPNS1P04632 268 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 PCSK1P29120 753 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 KRT9P35527 623 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 SIM1P81133 766 aaPredicted RBP13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 RBP5P82980 135 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 ANKRD40Q6AI12 368 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 FBXO38Q6PIJ6 1188 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 DENND5BQ6ZUT9 1274 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 PHTF2Q8N3S3 785 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 GUF1Q8N442 669 aaKnown RBP13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 CHCHD4Q8N4Q1 142 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 KIAA0895Q8NCT3 520 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 OR8K1Q8NGG5 319 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 SPATA18Q8TC71 538 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 WHAMMQ8TF30 809 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 HVCN1Q96D96 273 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 ACCSQ96QU6 501 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 TTLL2Q9BWV7 592 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 TRPM5Q9NZQ8 1165 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 MYO1AQ9UBC5 1043 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 ITGA11Q9UKX5 1188 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 LOC400499M0QZD8 3231 aa13.44□□□□□ -0.26
CHRNA1-205ENST00000409542 TCRBV21S2A2A0A5A6 115 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 FGFR1OPO95684 399 aaKnown RBP13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 APODP05090 189 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 CYP27A1Q02318 531 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 EHHADHQ08426 723 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 ERCC6LQ2NKX8 1250 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 FIGNQ5HY92 759 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 PEAR1Q5VY43 1037 aaPredicted RBP13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 LYSMD4Q5XG99 296 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 LRRN4CLQ8ND94 238 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 UBE2Q2Q8WVN8 375 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 UBXN4Q92575 508 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 WBP2Q969T9 261 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 ERLEC1Q96DZ1 483 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 PCED1BQ96HM7 432 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 MRPL45Q9BRJ2 306 aaKnown RBP13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 TUBGCP2Q9BSJ2 902 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 GTPBP2Q9BX10 602 aaKnown RBP13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 CARD6Q9BX69 1037 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 SLC32A1Q9H598 525 aa13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 POLMQ9NP87 494 aaPredicted RBP13.43□□□□□ -0.26
CHRNA1-205ENST00000409542 ARHGEF4Q9NR80 690 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms