RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 VEGFBP49765 207 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 TKTL1P51854 596 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 MAP3K7CLP57077 242 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 ADCY1Q08828 1119 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 BFSP2Q13515 415 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 NOMO1Q15155 1222 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 KCTD19Q17RG1 926 aaPredicted RBP6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 DCAF6Q58WW2 860 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 RAB41Q5JT25 222 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 KIAA0319Q5VV43 1072 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 SLC9A4Q6AI14 798 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 FAM171BQ6P995 826 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 DARS2Q6PI48 645 aaKnown RBP6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 C4orf22Q6V702 233 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 LEKR1Q6ZMV7 388 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 RTN4RL1Q86UN2 441 aaPredicted RBP6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 PPIL6Q8IXY8 311 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 DEFB106AQ8N104 65 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 PLD5Q8N7P1 536 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 C3orf58Q8NDZ4 430 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 URGCPQ8TCY9 931 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 CLEC4CQ8WTT0 213 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 RSPH1Q8WYR4 309 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 IRGQQ8WZA9 623 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 FAM149B1Q96BN6 582 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 HAUS1Q96CS2 278 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 FAF2Q96CS3 445 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 SMARCD1Q96GM5 515 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 PCED1BQ96HM7 432 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 SUSD3Q96L08 255 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 TTC25Q96NG3 672 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 SERPINB12Q96P63 405 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 SLC9A7Q96T83 725 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 SNRNP25Q9BV90 132 aaKnown RBP6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 TRIM62Q9BVG3 475 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 TMUB1Q9BVT8 246 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 PHACTR1Q9C0D0 580 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 CSNK1G1Q9HCP0 422 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 TMEM51Q9NW97 253 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 RCOR3Q9P2K3 495 aaPredicted RBP6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 SAE1Q9UBE0 346 aaPredicted RBP6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 SHOC2Q9UQ13 582 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 INPP5FQ9Y2H2 1132 aa6.53□□□□□ -1.36
GTF3C3-202ENST00000409364 TLDC2A0PJX2 215 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 BCLAF3A2AJT9 711 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 H7C0C1 242 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 TERTO14746 1132 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ALOX15BO15296 676 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 EIF3HO15372 352 aaKnown RBP eCLIP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 RGS16O15492 202 aaPredicted RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 SHOX2O60902 331 aaPredicted RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 DAB1O75553 588 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ZNF189O75820 626 aaPredicted RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 BEST1O76090 585 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ZBED1O96006 694 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 AGTP01019 485 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ZSCAN5DPP0CG00 497 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 SELPP16109 830 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ARL4AP40617 200 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 MAGEA4P43358 317 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ATP5OP48047 213 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 SULT1E1P49888 294 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 CDK7P50613 346 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 IRAK1P51617 712 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 AIF1P55008 147 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 TSPY1Q01534 308 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ROR1Q01973 937 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ADIGQ0VDE8 80 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 XRCC4Q13426 336 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 STAT4Q14765 748 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 KYNUQ16719 465 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 RAB6CQ53S08 254 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ZC3H12AQ5D1E8 599 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 NOMO2Q5JPE7 1267 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 OVOS1Q6IE37 1185 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 CENPUQ71F23 418 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 FAM35AQ86V20 835 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 SCML4Q8N228 414 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 SH2D3CQ8N5H7 860 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 FAM71DQ8N9W8 422 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 PCDH19Q8TAB3 1148 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ZNF296Q8WUU4 475 aaPredicted RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 SLC2A13Q96QE2 648 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 RBM15Q96T37 977 aaKnown RBP eCLIP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 NPY6RQ99463 290 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 SMOQ99835 787 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 PAAF1Q9BRP4 392 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 RAB6CQ9H0N0 254 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 CDC42EP4Q9H3Q1 356 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 DHX35Q9H5Z1 703 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 ELAC1Q9H777 363 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 NRDE2Q9H7Z3 1164 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 CNOT10Q9H9A5 744 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 PNPLA8Q9NP80 782 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 KRT82Q9NSB4 513 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 SAGE1Q9NXZ1 904 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 NOVA2Q9UNW9 492 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 AP4E1Q9UPM8 1137 aa6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 TRIP12Q14669 1992 aaPredicted RBP6.52□□□□□ -1.37
GTF3C3-202ENST00000409364 SCN1AP35498 2009 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms