RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 EXT2Q93063 718 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 DTNBP1Q96EV8 351 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 TCTN2Q96GX1 697 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 MAP6Q96JE9 813 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 LINC00615Q96LM1 132 aaPredicted RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 SAMD11Q96NU1 681 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 INTS14Q96SY0 518 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 BCL7BQ9BQE9 202 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 MYL10Q9BUA6 226 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 HERC2P3Q9BVR0 1158 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CCDC106Q9BWC9 280 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CAPS2Q9BXY5 557 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 NACA2Q9H009 215 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 NELFAQ9H3P2 528 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 MUC13Q9H3R2 512 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 TTC12Q9H892 705 aaPredicted RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 SMURF2Q9HAU4 748 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 PALMDQ9NP74 551 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 PSD3Q9NYI0 1048 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CALCOCO1Q9P1Z2 691 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 RPH3AQ9Y2J0 694 aaPredicted RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 NOSIPQ9Y314 301 aaKnown RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CEP152O94986 1710 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 POGZQ7Z3K3 1410 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 ZNF335Q9H4Z2 1342 aaPredicted RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 UQCRHLA0A096LP55 91 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CCDC78A2IDD5 438 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 VPS37CA5D8V6 355 aaPredicted RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 ISM1B1AKI9 464 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 SYN3O14994 580 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 MEFVO15553 781 aaPredicted RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 EXOC3O60645 756 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 MTRF1O75570 445 aaKnown RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 UQCRHP07919 91 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CKBP12277 381 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CCR1P32246 355 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 PGM1P36871 562 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 LTBRP36941 435 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 SLC5A3P53794 718 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 HDAC4P56524 1084 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 MRPS9P82933 396 aaKnown RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CYP4F8P98187 520 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 TRDNQ13061 729 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 ADRM1Q16186 407 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CAMK4Q16566 473 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 KIF4BQ2VIQ3 1234 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 PM20D1Q6GTS8 502 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 FAM173BQ6P4H8 233 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 TMEM270Q6UE05 265 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CATSPERGQ6ZRH7 1159 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 RUFY3Q7L099 469 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 MRPL41Q8IXM3 137 aaKnown RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 FAM9CQ8IZT9 166 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CCAR2Q8N163 923 aaKnown RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 NECAB1Q8N987 351 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 ANKRD20A12PQ8NF67 263 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 ZDHHC12Q96GR4 267 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 MRGPRX2Q96LB1 330 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 RTKNQ9BST9 563 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 PUS3Q9BZE2 481 aaKnown RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 POLMQ9NP87 494 aaPredicted RBP4.57□□□□□ -1.68
GTDC1-206ENST00000409214 EXOC1Q9NV70 894 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 PNPOQ9NVS9 261 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 KIAA1217Q5T5P2 1943 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 METP08581 1390 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 TMEM94Q12767 1356 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 MAP3K19Q56UN5 1328 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 PASKQ96RG2 1323 aa4.57□□□□□ -1.68
GTDC1-206ENST00000409214 WNT10BO00744 389 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 SOCS6O14544 535 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 IFIT3O14879 490 aaKnown RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 EFSO43281 561 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 SRGAP3O43295 1099 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 KCNQ3O43525 872 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 TNFSF14O43557 240 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 TSPAN9O75954 239 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 NPPAP01160 153 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 MMP2P08253 660 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 UBTFL1P0CB47 393 aaPredicted RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 HSPA1AP0DMV8 641 aaKnown RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 HSPA1BP0DMV9 641 aaKnown RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 BCRP11274 1271 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 SELLP14151 372 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 EN2P19622 333 aaPredicted RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 CDH3P22223 829 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 TPP2P29144 1249 aaPredicted RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 PIP4K2AP48426 406 aaPredicted RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 AARSP49588 968 aaKnown RBP eCLIP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 ATXN3P54252 364 aaPredicted RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 KCNQ4P56696 695 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 UBE2HP62256 183 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 YBX1P67809 324 aaKnown RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 RBM6P78332 1123 aaKnown RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 LACTBP83111 547 aaPredicted RBP4.56□□□□□ -1.68
GTDC1-206ENST00000409214 KRT17Q04695 432 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 SPEM2Q0P670 501 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 SLC13A2Q13183 592 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 CTBP1Q13363 440 aa4.56□□□□□ -1.68
GTDC1-206ENST00000409214 TNFAIP1Q13829 316 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms