RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 EPS8L1Q8TE68 723 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 CAPSLQ8WWF8 208 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 MED15Q96RN5 788 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 RNF146Q9NTX7 359 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 SELENONQ9NZV5 590 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 TMA7Q9Y2S6 64 aaKnown RBP18.19■□□□□ 0.5
SMPD4-202ENST00000409031 SQORQ9Y6N5 450 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 ALOX15BO15296 676 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 CYP1A2P05177 515 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 PRKCBP05771 671 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 FDX1P10109 184 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 COX4I1P13073 169 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 UBE3AQ05086 875 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 MPP3Q13368 585 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 KCNK18Q7Z418 384 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 VWDEQ8N2E2 1590 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 TMEM245Q9H330 911 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 PCDHGB4Q9UN71 923 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 CEP170BQ9Y4F5 1589 aaPredicted RBP18.18■□□□□ 0.5
SMPD4-202ENST00000409031 COPG1Q9Y678 874 aaKnown RBP18.18■□□□□ 0.5
SMPD4-202ENST00000409031 MRASO14807 208 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 SULT1E1P49888 294 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 SVOPQ8N4V2 548 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 COX4I2Q96KJ9 171 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 MTMR9Q96QG7 549 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 SEMA6AQ9H2E6 1030 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 POLR1BQ9H9Y6 1135 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 PRR12Q9ULL5 1215 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 CSADQ9Y600 493 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 ALOX5P09917 674 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 PSMB9P28065 219 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 RBP5P82980 135 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 IL17AQ16552 155 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 CEP78Q5JTW2 689 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 SEPT12Q8IYM1 358 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 ZSCAN18Q8TBC5 510 aaPredicted RBP18.18■□□□□ 0.5
SMPD4-202ENST00000409031 SLC10A4Q96EP9 437 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 L3MBTL3Q96JM7 780 aaPredicted RBP18.18■□□□□ 0.5
SMPD4-202ENST00000409031 ZNF570Q96NI8 536 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 SLC25A23Q9BV35 468 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 JPH1Q9HDC5 661 aaPredicted RBP18.18■□□□□ 0.5
SMPD4-202ENST00000409031 FAM32AQ9Y421 112 aaKnown RBP18.18■□□□□ 0.5
SMPD4-202ENST00000409031 DAGLAQ9Y4D2 1042 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 BAZ2BQ9UIF8 2168 aaKnown RBP18.18■□□□□ 0.5
SMPD4-202ENST00000409031 PSMC6P62333 389 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 ANO7Q6IWH7 933 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 CATSPER4Q7RTX7 472 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 UNC45BQ8IWX7 931 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 TNIP3Q96KP6 325 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 DEPDC7Q96QD5 511 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 THUMPD3Q9BV44 507 aaKnown RBP18.18■□□□□ 0.5
SMPD4-202ENST00000409031 RAD21L1Q9H4I0 556 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 PLEKHA5Q9HAU0 1116 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 USP18Q9UMW8 372 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 USP20Q9Y2K6 914 aa18.18■□□□□ 0.5
SMPD4-202ENST00000409031 EEF2KO00418 725 aaKnown RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 DDHD2O94830 711 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 MYO1DO94832 1006 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 TGDSO95455 350 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 MAPTP10636 758 aaKnown RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 COG2Q14746 738 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 PLA2G4FQ68DD2 849 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 APTXQ7Z2E3 356 aaKnown RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 NT5C1AQ9BXI3 368 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 GOLGA8TH3BQL2 631 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 C6orf222P0C671 652 aaPredicted RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 ZSCAN5DPP0CG00 497 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 MARSP56192 900 aaKnown RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 ANO4Q32M45 955 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 FUT11Q495W5 492 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 CBWD6Q4V339 395 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 CBWD3Q5JTY5 395 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 CBWD5Q5RIA9 395 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 ARMC3Q5W041 872 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 CYP2R1Q6VVX0 501 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 DSTYKQ6XUX3 929 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 RNPEPQ9H4A4 650 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 CCNA2P20248 432 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 RTP1P59025 263 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 GTF2H3Q13889 308 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 OTUD3Q5T2D3 398 aaPredicted RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 EEPD1Q7L9B9 569 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 OR8H2Q8N162 312 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 SFRP1Q8N474 314 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 DRAXINQ8NBI3 349 aaPredicted RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 GLIS3Q8NEA6 775 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 TRPC7Q9HCX4 862 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 RGSL1A5PLK6 1076 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 NR5A2O00482 541 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 ZSCAN9O15535 394 aaPredicted RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 CNOT3O75175 753 aaKnown RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 LGR5O75473 907 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 RPS6KA4O75676 772 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 ATP6V1B2P21281 511 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 GLRBP48167 497 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 RBM15BQ8NDT2 890 aaKnown RBP18.17■□□□□ 0.5
SMPD4-202ENST00000409031 DNAJC19Q96DA6 116 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 RMDN1Q96DB5 314 aa18.17■□□□□ 0.5
SMPD4-202ENST00000409031 TYW5A2RUC4 315 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms