RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 TFAP2AP05549 437 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 ATP6V1B1P15313 513 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 NFX1Q12986 1120 aaKnown RBP16.84■□□□□ 0.29
LSP1-204ENST00000406638 CAPSQ13938 189 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 TRIP10Q15642 601 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 DNAL1Q4LDG9 190 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 ANKRD22Q5VYY1 191 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 ARPINQ7Z6K5 226 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 ALLCQ8N6M5 410 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 HELQQ8TDG4 1101 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 AFG1LQ8WV93 481 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 PRPF31Q8WWY3 499 aaKnown RBP16.84■□□□□ 0.29
LSP1-204ENST00000406638 SLC7A3Q8WY07 619 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 ACSF2Q96CM8 615 aaPredicted RBP16.84■□□□□ 0.29
LSP1-204ENST00000406638 ACAP3Q96P50 834 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 NTPCRQ9BSD7 190 aaKnown RBP16.84■□□□□ 0.29
LSP1-204ENST00000406638 NIFKQ9BYG3 293 aaKnown RBP16.84■□□□□ 0.29
LSP1-204ENST00000406638 ST6GALNAC4Q9H4F1 302 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 ARHGAP28Q9P2N2 729 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 PCDHGB4Q9UN71 923 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 PCDHGB5Q9Y5G0 923 aa16.84■□□□□ 0.29
LSP1-204ENST00000406638 LOXHD1Q8IVV2 1947 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 P4HA2O15460 535 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 DHRS4L1P0CG22 281 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 SRGAP2CP0DJJ0 459 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 SMIM18P0DKX4 95 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 FOLH1Q04609 750 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 RALGPS1Q5JS13 557 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 C1orf228Q6PIY5 440 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 SAPCD2Q86UD0 394 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 CDR2LQ86X02 465 aaPredicted RBP16.83■□□□□ 0.29
LSP1-204ENST00000406638 FBXO36Q8NEA4 188 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 POMGNT1Q8WZA1 660 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 WDR83Q9BRX9 315 aaKnown RBP16.83■□□□□ 0.29
LSP1-204ENST00000406638 TARS2Q9BW92 718 aaKnown RBP16.83■□□□□ 0.29
LSP1-204ENST00000406638 MAF1Q9H063 256 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 FLRT1Q9NZU1 646 aa16.83■□□□□ 0.29
LSP1-204ENST00000406638 DKC1O60832 514 aaKnown RBP eCLIP16.83■□□□□ 0.28
LSP1-204ENST00000406638 SUPT3HO75486 399 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 PDE5AO76074 875 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 CLPTM1O96005 669 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 C6orf222P0C671 652 aaPredicted RBP16.83■□□□□ 0.28
LSP1-204ENST00000406638 GTF2H1P32780 548 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 ABCD1P33897 745 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 PHBP35232 272 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 ARL2P36404 184 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 AQP5P55064 265 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 HIC1Q14526 733 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 TTLL4Q14679 1199 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 SNRNP35Q16560 246 aaKnown RBP16.83■□□□□ 0.28
LSP1-204ENST00000406638 GRAMD1BQ3KR37 738 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 NADK2Q4G0N4 442 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 EFHC1Q5JVL4 640 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 PALM2Q8IXS6 379 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 METTL25Q8N6Q8 603 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 EFCAB3Q8N7B9 438 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 ZFP28Q8NHY6 868 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 ALKBH8Q96BT7 664 aaKnown RBP16.83■□□□□ 0.28
LSP1-204ENST00000406638 PARK7Q99497 189 aaKnown RBP16.83■□□□□ 0.28
LSP1-204ENST00000406638 FAM213AQ9BRX8 229 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 PI4K2AQ9BTU6 479 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 GRIP2Q9C0E4 1043 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 PPCSQ9HAB8 311 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 NDUFA13Q9P0J0 144 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 STRIP2Q9ULQ0 834 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 UNGP13051 313 aaPredicted RBP16.83■□□□□ 0.28
LSP1-204ENST00000406638 PCSK6P29122 969 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 SERPINB6P35237 376 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 ACOT2P49753 483 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 CLCN3P51790 818 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 BTKQ06187 659 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 TBL3Q12788 808 aaKnown RBP16.83■□□□□ 0.28
LSP1-204ENST00000406638 ITGA9Q13797 1035 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 CCL14Q16627 93 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 ANKRD20A4Q4UJ75 823 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 PAOXQ6QHF9 649 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 MFSD7Q6UXD7 560 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 CDHR3Q6ZTQ4 885 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 CHSY1Q86X52 802 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 PASD1Q8IV76 773 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 KATNAL2Q8IYT4 538 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 POU5F2Q8N7G0 328 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 ATP11CQ8NB49 1132 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 MAML3Q96JK9 1138 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 ACSS3Q9H6R3 686 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 KCNK4Q9NYG8 393 aa16.83■□□□□ 0.28
LSP1-204ENST00000406638 SAE1Q9UBE0 346 aaPredicted RBP16.83■□□□□ 0.28
LSP1-204ENST00000406638 ASB14A6NK59 587 aa16.82■□□□□ 0.28
LSP1-204ENST00000406638 PIM1P11309 404 aaPredicted RBP16.82■□□□□ 0.28
LSP1-204ENST00000406638 RPL5P46777 297 aaKnown RBP16.82■□□□□ 0.28
LSP1-204ENST00000406638 PLOD1Q02809 727 aaPredicted RBP16.82■□□□□ 0.28
LSP1-204ENST00000406638 FAAP100Q0VG06 881 aa16.82■□□□□ 0.28
LSP1-204ENST00000406638 CBX3Q13185 183 aa16.82■□□□□ 0.28
LSP1-204ENST00000406638 CYLC2Q14093 348 aaPredicted RBP16.82■□□□□ 0.28
LSP1-204ENST00000406638 BBS9Q3SYG4 887 aa16.82■□□□□ 0.28
LSP1-204ENST00000406638 FAM160B1Q5W0V3 765 aa16.82■□□□□ 0.28
LSP1-204ENST00000406638 CES4AQ5XG92 561 aa16.82■□□□□ 0.28
LSP1-204ENST00000406638 FAM91A1Q658Y4 838 aa16.82■□□□□ 0.28
LSP1-204ENST00000406638 EXD1Q8NHP7 514 aa16.82■□□□□ 0.28
LSP1-204ENST00000406638 TAS1R2Q8TE23 839 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms