RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 PATJQ8NI35 1801 aa16.91■□□□□ 0.3
PARVB-203ENST00000404989 CFAP69A5D8W1 941 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 YJEFN3A6XGL0 299 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 E7ENQ6 273 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 APOL1O14791 398 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 RIPK2O43353 540 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 MYCP01106 439 aaPredicted RBP16.9■□□□□ 0.3
PARVB-203ENST00000404989 BDNFP23560 247 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 LMAN1P49257 510 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 SKOR1P84550 965 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 GPS1Q13098 491 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 SLC29A2Q14542 456 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 KRT71Q3SY84 523 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 ZNF771Q7L3S4 317 aaPredicted RBP16.9■□□□□ 0.3
PARVB-203ENST00000404989 CTU1Q7Z7A3 348 aaKnown RBP16.9■□□□□ 0.3
PARVB-203ENST00000404989 CCDC25Q86WR0 208 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 SH2D3CQ8N5H7 860 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 STMN4Q9H169 189 aaPredicted RBP16.9■□□□□ 0.3
PARVB-203ENST00000404989 DNAJB4Q9UDY4 337 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 AP4E1Q9UPM8 1137 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 NAALADL1Q9UQQ1 740 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 SCN5AQ14524 2016 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 TET1Q8NFU7 2136 aa16.9■□□□□ 0.3
PARVB-203ENST00000404989 PITPNM1O00562 1244 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 USP17L7P0C7H9 530 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 RBP3P10745 1247 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 CCL5P13501 91 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 RPL22P35268 128 aaKnown RBP16.89■□□□□ 0.3
PARVB-203ENST00000404989 C6orf118Q5T5N4 469 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 RNASEH2BQ5TBB1 312 aaKnown RBP16.89■□□□□ 0.3
PARVB-203ENST00000404989 KCTD16Q68DU8 428 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 C1orf228Q6PIY5 440 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 CRIPAKQ8N1N5 446 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 ZCCHC9Q8N567 271 aaKnown RBP16.89■□□□□ 0.3
PARVB-203ENST00000404989 CASD1Q96PB1 797 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 PHACTR1Q9C0D0 580 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 CDC42EP4Q9H3Q1 356 aaKnown RBP16.89■□□□□ 0.3
PARVB-203ENST00000404989 DHX35Q9H5Z1 703 aaKnown RBP16.89■□□□□ 0.3
PARVB-203ENST00000404989 POPDC2Q9HBU9 364 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 RCOR3Q9P2K3 495 aaPredicted RBP16.89■□□□□ 0.3
PARVB-203ENST00000404989 SHOC2Q9UQ13 582 aa16.89■□□□□ 0.3
PARVB-203ENST00000404989 CYP2F1P24903 491 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 OR1G1P47890 313 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 MNX1P50219 401 aaPredicted RBP16.89■□□□□ 0.29
PARVB-203ENST00000404989 GATMP50440 423 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 AIF1P55008 147 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 TSPY1Q01534 308 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 ROR1Q01973 937 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 DMTNQ08495 405 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 PM20D1Q6GTS8 502 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 KDM7AQ6ZMT4 941 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 B4GALNT4Q76KP1 1039 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 FAM131BQ86XD5 332 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 SCML4Q8N228 414 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 PYROXD2Q8N2H3 581 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 TRIM62Q9BVG3 475 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 CENPHQ9H3R5 247 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 NRDE2Q9H7Z3 1164 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 DNAJC17Q9NVM6 304 aaKnown RBP16.89■□□□□ 0.29
PARVB-203ENST00000404989 USP3Q9Y6I4 520 aa16.89■□□□□ 0.29
PARVB-203ENST00000404989 ZNF638Q14966 1978 aaKnown RBP16.89■□□□□ 0.29
PARVB-203ENST00000404989 BRCA2P51587 3418 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 VWA8A3KMH1 1905 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 M0QYT0 321 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 OAZ2O95190 189 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 ZBED1O96006 694 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 IFNB1P01574 187 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 NR1D1P20393 614 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 ACTN2P35609 894 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 BCAR1P56945 870 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 PPP6R3Q5H9R7 873 aaPredicted RBP16.88■□□□□ 0.29
PARVB-203ENST00000404989 C4orf22Q6V702 233 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 BZW1Q7L1Q6 419 aaKnown RBP16.88■□□□□ 0.29
PARVB-203ENST00000404989 IRGQQ8WZA9 623 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 SEPT8Q92599 483 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 PGM2Q96G03 612 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 TTC25Q96NG3 672 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 SLC9A7Q96T83 725 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 USP29Q9HBJ7 922 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 PNPLA8Q9NP80 782 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 TMPRSS4Q9NRS4 437 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 PIGVQ9NUD9 493 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 CWC15Q9P013 229 aaKnown RBP16.88■□□□□ 0.29
PARVB-203ENST00000404989 FARP1Q9Y4F1 1045 aaPredicted RBP16.88■□□□□ 0.29
PARVB-203ENST00000404989 PCDHB7Q9Y5E2 793 aa16.88■□□□□ 0.29
PARVB-203ENST00000404989 TANC1Q9C0D5 1861 aa16.87■□□□□ 0.29
PARVB-203ENST00000404989 TTC3P53804 2025 aa16.87■□□□□ 0.29
PARVB-203ENST00000404989 TRAPPC3O43617 180 aa16.87■□□□□ 0.29
PARVB-203ENST00000404989 ZNF189O75820 626 aaPredicted RBP16.87■□□□□ 0.29
PARVB-203ENST00000404989 TTC4O95801 387 aa16.87■□□□□ 0.29
PARVB-203ENST00000404989 LTFP02788 710 aa16.87■□□□□ 0.29
PARVB-203ENST00000404989 CAPN2P17655 700 aa16.87■□□□□ 0.29
PARVB-203ENST00000404989 ARL4AP40617 200 aa16.87■□□□□ 0.29
PARVB-203ENST00000404989 NR2C2P49116 596 aa16.87■□□□□ 0.29
PARVB-203ENST00000404989 YWHAHQ04917 246 aaPredicted RBP16.87■□□□□ 0.29
PARVB-203ENST00000404989 SLC10A2Q12908 348 aaPredicted RBP16.87■□□□□ 0.29
PARVB-203ENST00000404989 DARS2Q6PI48 645 aaKnown RBP16.87■□□□□ 0.29
PARVB-203ENST00000404989 ZC3H18Q86VM9 953 aaKnown RBP16.87■□□□□ 0.29
PARVB-203ENST00000404989 FAM71DQ8N9W8 422 aa16.87■□□□□ 0.29
PARVB-203ENST00000404989 UHMK1Q8TAS1 419 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms