RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 KLC1Q07866 573 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 BST1Q10588 318 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 LBRQ14739 615 aaKnown RBP11.13□□□□□ -0.63
CLIP4-204ENST00000404424 TMEM132DQ14C87 1099 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SYCP2LQ5T4T6 812 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SNX30Q5VWJ9 437 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SCYL2Q6P3W7 929 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 TIFABQ6ZNK6 161 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 ARCQ7LC44 396 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 CRLF3Q8IUI8 442 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 NUDCD3Q8IVD9 361 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 ARMC2Q8NEN0 867 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 PCDH19Q8TAB3 1148 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 PRR11Q96HE9 360 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-204ENST00000404424 ZNF668Q96K58 619 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-204ENST00000404424 EBNA1BP2Q99848 306 aaKnown RBP11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SIKE1Q9BRV8 207 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 GCOM2Q9BZD3 368 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-204ENST00000404424 ASCC2Q9H1I8 757 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-204ENST00000404424 NMRK1Q9NWW6 199 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 ZNF212Q9UDV6 495 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 C2CD2Q9Y426 696 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 HEY1Q9Y5J3 304 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 GCATO75600 419 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SLC25A27O95847 323 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 PFKMP08237 780 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 IQCF3P0C7M6 154 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SKIP12755 728 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 CYP3A5P20815 502 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 PGM1P36871 562 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SLC6A3Q01959 620 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 TEX44Q53QW1 395 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 STXBP5Q5T5C0 1151 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 UNC5AQ6ZN44 842 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 DPH6Q7L8W6 267 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 TTC7BQ86TV6 843 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 ZDHHC17Q8IUH5 632 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 PPFIBP2Q8ND30 876 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 FAM172AQ8WUF8 416 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 TRAPPC12Q8WVT3 735 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SIGLEC10Q96LC7 697 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SNRNP25Q9BV90 132 aaKnown RBP11.13□□□□□ -0.63
CLIP4-204ENST00000404424 PLAC1Q9HBJ0 212 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 XAB2Q9HCS7 855 aaKnown RBP11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SORCS3Q9UPU3 1222 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 LRCH1Q9Y2L9 728 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 LRRC37A2A6NM11 1700 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 LTBP3Q9NS15 1303 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 SOCS7O14512 581 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 CAPN9O14815 690 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 SNNO75324 88 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 NR2C2P49116 596 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 CHI3L2Q15782 390 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 AMHR2Q16671 573 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 SLC10A6Q3KNW5 377 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 RAB6CQ53S08 254 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 ZNF484Q5JVG2 852 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 IRGCQ6NXR0 463 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 OLFML1Q6UWY5 402 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 TMEM110Q86TL2 294 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 ALYREFQ86V81 257 aaKnown RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 ARID3BQ8IVW6 561 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 PIWIL1Q96J94 861 aaKnown RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 ACAP3Q96P50 834 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 SLC4A5Q9BY07 1137 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 SLC13A1Q9BZW2 595 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 RAB6CQ9H0N0 254 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 PDZD7Q9H5P4 517 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 NGRNQ9NPE2 291 aaKnown RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 ARHGEF4Q9NR80 690 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 SMYD2Q9NRG4 433 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 PCDHA11Q9Y5I1 949 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 B2RBV5 119 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 PEX10O60683 326 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 SKAP2O75563 359 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 USP2O75604 605 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 GRAP2O75791 330 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 KRT36O76013 467 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 C22orf31O95567 290 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 BPGMP07738 259 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 GCLCP48506 637 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 SARNPP82979 210 aaKnown RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 AP1B1Q10567 949 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 WASHC5Q12768 1159 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 DNAL1Q4LDG9 190 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 C6orf163Q5TEZ5 329 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 FAXCQ5TGI0 409 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 KYAT3Q6YP21 454 aaKnown RBP11.12□□□□□ -0.63
CLIP4-204ENST00000404424 LRRC74BQ6ZQY2 392 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 SESTD1Q86VW0 696 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 NDUFAF2Q8N183 169 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 FAM136AQ96C01 138 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 MECRQ9BV79 373 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 C1orf21Q9H246 121 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 NRDE2Q9H7Z3 1164 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 THAP1Q9NVV9 213 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 TAGLN3Q9UI15 199 aa11.12□□□□□ -0.63
CLIP4-204ENST00000404424 C2orf71A6NGG8 1288 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 SPECC1L-ADORA2AF8WAN1 911 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms