RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PLLPQ9Y342 182 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 ENO4A6NNW6 628 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 CCNFP41002 786 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 GABRB2P47870 512 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 RCN2Q14257 317 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 LY6KQ17RY6 165 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 FAM47CQ5HY64 1035 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 PRPF39Q86UA1 669 aaKnown RBP20.58■□□□□ 0.88
CCDC47-202ENST00000403162 ALYREFQ86V81 257 aaKnown RBP20.58■□□□□ 0.88
CCDC47-202ENST00000403162 PDCD7Q8N8D1 485 aaKnown RBP20.58■□□□□ 0.88
CCDC47-202ENST00000403162 FAF2Q96CS3 445 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 MCRS1Q96EZ8 462 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 PDGFCQ9NRA1 345 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 NRBP2Q9NSY0 501 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 ARMCX1Q9P291 453 aa20.58■□□□□ 0.88
CCDC47-202ENST00000403162 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.58■□□□□ 0.88
CCDC47-202ENST00000403162 MAFO75444 373 aaPredicted RBP20.57■□□□□ 0.88
CCDC47-202ENST00000403162 UPP2O95045 317 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 SNAI1O95863 264 aaPredicted RBP20.57■□□□□ 0.88
CCDC47-202ENST00000403162 YWHAZP63104 245 aaKnown RBP20.57■□□□□ 0.88
CCDC47-202ENST00000403162 TFDP2Q14188 446 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 ATG16L1Q676U5 607 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 NPNTQ6UXI9 565 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 UCMAQ8WVF2 138 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 PRPF31Q8WWY3 499 aaKnown RBP20.57■□□□□ 0.88
CCDC47-202ENST00000403162 PCYT2Q99447 389 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 CFHR5Q9BXR6 569 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 BCO2Q9BYV7 579 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 ASNSD1Q9NWL6 643 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 SIRPGQ9P1W8 387 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 PAK5Q9P286 719 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 ANK1P16157 1881 aa20.57■□□□□ 0.88
CCDC47-202ENST00000403162 TRDMT1O14717 391 aaKnown RBP20.56■□□□□ 0.88
CCDC47-202ENST00000403162 ARIH2O95376 493 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 TNNC2P02585 160 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 ATP5BP06576 529 aaKnown RBP20.56■□□□□ 0.88
CCDC47-202ENST00000403162 PRKCHP24723 683 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 THOC5Q13769 683 aaKnown RBP20.56■□□□□ 0.88
CCDC47-202ENST00000403162 HSF5Q4G112 596 aaPredicted RBP20.56■□□□□ 0.88
CCDC47-202ENST00000403162 OR52E8Q6IFG1 317 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 RTP4Q96DX8 246 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 CFAP36Q96G28 342 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 ANKRD36BP1Q96IX9 119 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 TSC22D3Q99576 134 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 APBA2Q99767 749 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 VTA1Q9NP79 307 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 DLGAP2Q9P1A6 1054 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 B4GALT4O60513 344 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 AVILO75366 819 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 LGSNQ5TDP6 509 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 ZC3H18Q86VM9 953 aaKnown RBP20.56■□□□□ 0.88
CCDC47-202ENST00000403162 PPM1NQ8N819 430 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 RAB3IL1Q8TBN0 382 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 PEBP4Q96S96 227 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 WWP1Q9H0M0 922 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 USP29Q9HBJ7 922 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 POPDC2Q9HBU9 364 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 SCOCQ9UIL1 159 aa20.56■□□□□ 0.88
CCDC47-202ENST00000403162 B2RBV5 119 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 MAP3K7O43318 606 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 MRPS5P82675 430 aaKnown RBP20.55■□□□□ 0.88
CCDC47-202ENST00000403162 BST1Q10588 318 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 MMRN1Q13201 1228 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 TTLL4Q14679 1199 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 CCL14Q16627 93 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 TEX44Q53QW1 395 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 NET1Q7Z628 596 aaPredicted RBP20.55■□□□□ 0.88
CCDC47-202ENST00000403162 SPDYE1Q8NFV5 336 aaPredicted RBP20.55■□□□□ 0.88
CCDC47-202ENST00000403162 DTX3LQ8TDB6 740 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 E2F7Q96AV8 911 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 IFT43Q96FT9 208 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 RAB6BQ9NRW1 208 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 FLRT1Q9NZU1 646 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 NXF1Q9UBU9 619 aaKnown RBP20.55■□□□□ 0.88
CCDC47-202ENST00000403162 ANGPTL2Q9UKU9 493 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 MGAMO43451 1857 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 ZSWIM8A7E2V4 1837 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 EME2A4GXA9 379 aaPredicted RBP20.55■□□□□ 0.88
CCDC47-202ENST00000403162 SMIM24O75264 130 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 PRKCBP05771 671 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 GSTA2P09210 222 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 TXNP10599 105 aaKnown RBP20.55■□□□□ 0.88
CCDC47-202ENST00000403162 MAGEA6P43360 314 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 RAP1GAPP47736 663 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 ZNF143P52747 638 aaPredicted RBP20.55■□□□□ 0.88
CCDC47-202ENST00000403162 CDH6P55285 790 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 TBCCQ15814 346 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 TAPT1Q6NXT6 567 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 CYP4V2Q6ZWL3 525 aaPredicted RBP20.55■□□□□ 0.88
CCDC47-202ENST00000403162 TREML1Q86YW5 311 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 CTAGE3PQ8IX95 158 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 TEKT4Q8WW24 435 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 ZNF184Q99676 751 aaPredicted RBP20.55■□□□□ 0.88
CCDC47-202ENST00000403162 SH3GL3Q99963 347 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 MECRQ9BV79 373 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.55■□□□□ 0.88
CCDC47-202ENST00000403162 PLA2G4CQ9UP65 541 aa20.55■□□□□ 0.88
CCDC47-202ENST00000403162 H3BRJ5 948 aa20.54■□□□□ 0.88
CCDC47-202ENST00000403162 H7C0C1 242 aa20.54■□□□□ 0.88
CCDC47-202ENST00000403162 RFPL1O75677 317 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms