RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 SMIM11AP58511 58 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 BYSLQ13895 437 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 C19orf35Q6ZS72 473 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 BRSK2Q8IWQ3 736 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 DIS3L2Q8IYB7 885 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 JARID2Q92833 1246 aaPredicted RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 ROGDIQ9GZN7 287 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ZNF14P17017 642 aaPredicted RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 GGCXP38435 758 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 TFB1MQ8WVM0 346 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 C7orf50Q9BRJ6 194 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 NGRNQ9NPE2 291 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 HPF1Q9NWY4 346 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 TDRD9Q8NDG6 1382 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 H3BM21 787 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ACSL4O60488 711 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 SEC24AO95486 1093 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 FASP25445 335 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ZAP70P43403 619 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 IFNLR1Q8IU57 520 aaPredicted RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 CROTQ9UKG9 612 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 PCDHA13Q9Y5I0 950 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 LOC100653049A0A140TA62 436 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 SRRM3A6NNA2 597 aaPredicted RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 PDE1AP54750 535 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
CACNA1C-220ENST00000399655 C9orf43Q8TAL5 461 aaPredicted RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 CCDC107Q8WV48 283 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 KAT2AQ92830 837 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 EPRSP07814 1512 aaKnown RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 MROH7-TTC4A0A0A0MT08 1334 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 MROH7Q68CQ1 1323 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 ZNF682O95780 498 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 AGAP9Q5VTM2 703 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 OR6B2Q6IFH4 312 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 ZBTB49Q6ZSB9 765 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 RHBDF1Q96CC6 855 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 CLPTM1LQ96KA5 538 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 NT5C1AQ9BXI3 368 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 HOXC12P31275 282 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 SDC2P34741 201 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 DLSTP36957 453 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 NR1D2Q14995 579 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 PLET1Q6UQ28 207 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 ANKRD13DQ6ZTN6 518 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 GALNT6Q8NCL4 622 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 ATG4AQ8WYN0 398 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 PHF20Q9BVI0 1012 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 ZNF639Q9UID6 485 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 DOPEY2Q9Y3R5 2298 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 ZNF891A8MT65 544 aaPredicted RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 ANKRD40Q6AI12 368 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 NMD3Q96D46 503 aaKnown RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 KLHL15Q96M94 604 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 KCTD14Q9BQ13 255 aaPredicted RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 KMT5AQ9NQR1 393 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 ASMTLO95671 621 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 GSTT2BP0CG30 244 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 SCN4BQ8IWT1 228 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 NARFQ9UHQ1 456 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 GRID1Q9ULK0 1009 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 PSAPP07602 524 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 MYBL2P10244 700 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 DEPDC4Q8N2C3 294 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 C17orf53Q8N3J3 647 aaPredicted RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 ILKAPQ9H0C8 392 aaPredicted RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 GPAMQ9HCL2 828 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 PEX14O75381 377 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 HPCAL1P37235 193 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 PTRHD1Q6GMV3 140 aaKnown RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 TMEM17Q86X19 198 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 TRPC4APQ8TEL6 797 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 PPP1R13LQ8WUF5 828 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 BTBD9Q96Q07 612 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 PDCD5O14737 125 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 GUF1Q8N442 669 aaKnown RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 POC5Q8NA72 575 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 HEXDCQ8WVB3 486 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 CLN6Q9NWW5 311 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 VPS4BO75351 444 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 RIPK1Q13546 671 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 ADPRHL2Q9NX46 363 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 FBXO9Q9UK97 447 aaPredicted RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 DHRS7Q9Y394 339 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 ATXN2Q99700 1313 aaKnown RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 hCG_1984214I3L0E3 225 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 CLOCKO15516 846 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 MDH1P40925 334 aaKnown RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 RAB7AP51149 207 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 SEMA3FQ13275 785 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 COBLL1Q53SF7 1204 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 CCNYL2Q5T2Q4 361 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 SCUBE1Q8IWY4 988 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 SLC4A11Q8NBS3 891 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 ENGASEQ8NFI3 743 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 DQX1Q8TE96 717 aaKnown RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 TUBGCP5Q96RT8 1024 aa8.81□□□□□ -1
CACNA1C-220ENST00000399655 TDRD1Q9BXT4 1180 aaKnown RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 ZNF214Q9UL59 606 aaPredicted RBP8.81□□□□□ -1
CACNA1C-220ENST00000399655 NSD3Q9BZ95 1437 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms