RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 RHOAP61586 193 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 ITGB3BPQ13352 177 aaPredicted RBP9.62□□□□□ -0.87
ATL3-201ENST00000398868 PARGQ86W56 976 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 CALML6Q8TD86 181 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 ZBTB45Q96K62 511 aaPredicted RBP9.62□□□□□ -0.87
ATL3-201ENST00000398868 ATP6V1HQ9UI12 483 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 GNG14A0A1W2PPG7 69 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 SOX6P35712 828 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 CCR4P51679 360 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 AKR1D1P51857 326 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 LAMTOR4Q0VGL1 99 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 STAT4Q14765 748 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 SCUBE3Q8IX30 993 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 ATP6V0D2Q8N8Y2 350 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 LPCAT1Q8NF37 534 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 TMEM79Q9BSE2 394 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 PARVBQ9HBI1 364 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 TRPC4Q9UBN4 977 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 CIDEBQ9UHD4 219 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 BLOC1S6Q9UL45 172 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 ANO9A1A5B4 782 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 SKIV2L2P42285 1042 aaKnown RBP9.62□□□□□ -0.87
ATL3-201ENST00000398868 ZNF200P98182 395 aaPredicted RBP9.62□□□□□ -0.87
ATL3-201ENST00000398868 RALGDSQ12967 914 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 ANKS6Q68DC2 871 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 KRT77Q7Z794 578 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 LENG1Q96BZ8 264 aaPredicted RBP9.62□□□□□ -0.87
ATL3-201ENST00000398868 KCNK16Q96T55 309 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 THAP2Q9H0W7 228 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.62□□□□□ -0.87
ATL3-201ENST00000398868 ZMYM5Q9UJ78 669 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 RIMS1Q86UR5 1692 aaKnown RBP9.62□□□□□ -0.87
ATL3-201ENST00000398868 SPATA31A6Q5VVP1 1343 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 CDK12Q9NYV4 1490 aaPredicted RBP9.62□□□□□ -0.87
ATL3-201ENST00000398868 IQCMA0A1B0GVH7 501 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 MIF4GDA9UHW6 222 aaKnown RBP9.62□□□□□ -0.87
ATL3-201ENST00000398868 FAM25AB3EWG3 89 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 FAM25CB3EWG5 89 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 FAM25GB3EWG6 89 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 IL1R1P14778 569 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 SYN1P17600 705 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 MYL6P60660 151 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 ADIGQ0VDE8 80 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 MFSD10Q14728 455 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 DGKKQ5KSL6 1271 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 CMTM5Q96DZ9 223 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 FICDQ9BVA6 458 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 PHF20Q9BVI0 1012 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 BPIFA1Q9NP55 256 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 SOHLH2Q9NX45 425 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 PHTF1Q9UMS5 762 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 PCDHGA4Q9Y5G9 962 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 CLTCL1P53675 1640 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 STIP1P31948 543 aaKnown RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 DSG3P32926 999 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 COX10Q12887 443 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 VGLL4Q14135 290 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 KPNB1Q14974 876 aaKnown RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 WLSQ5T9L3 541 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 PHF21BQ96EK2 531 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 PDP2Q9P2J9 529 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 ICAM1P05362 532 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 SEC13P55735 322 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 PLA2G4EQ3MJ16 856 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 C7orf61Q8IZ16 206 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 CHST13Q8NET6 341 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 ARHGEF26Q96DR7 871 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 OTUB1Q96FW1 271 aaPredicted RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 FAM111AQ96PZ2 611 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 ADAM2Q99965 735 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 POLR1AO95602 1720 aaPredicted RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 WNT10BO00744 389 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 FAM107AO95990 144 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 CTSEP14091 401 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 PTGER2P43116 358 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 KCNMA1Q12791 1236 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 ARMCX4Q5H9R4 360 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 HHIPL2Q6UWX4 724 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 FRMD5Q7Z6J6 570 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 DEPDC7Q96QD5 511 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 OMDQ99983 421 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 GINS4Q9BRT9 223 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 STN1Q9H668 368 aaKnown RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 IMPAD1Q9NX62 359 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 TRMT6Q9UJA5 497 aaKnown RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 KDM6AO15550 1401 aaPredicted RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 ATP6V1B2P21281 511 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 HSD17B3P37058 310 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 HALP42357 657 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 TKTL1P51854 596 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 DHX34Q14147 1143 aaKnown RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 FSCN1Q16658 493 aaKnown RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 GET4Q7L5D6 327 aaPredicted RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 SGSM3Q96HU1 749 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 THUMPD3Q9BV44 507 aaKnown RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 TRPM5Q9NZQ8 1165 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 PSMC3IPQ9P2W1 217 aaPredicted RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 STK39Q9UEW8 545 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 SAC3D1A6NKF1 404 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms