RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 RAB5CP51148 216 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 ELF3P78545 371 aaPredicted RBP13.17□□□□□ -0.3
CCBE1-201ENST00000398179 CTC1Q2NKJ3 1217 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 LMBR1LQ6UX01 489 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 CREB3L2Q70SY1 520 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 SLC13A5Q86YT5 568 aaPredicted RBP13.17□□□□□ -0.3
CCBE1-201ENST00000398179 ZNF321PQ8N8H1 164 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 HDAC11Q96DB2 347 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 VSX1Q9NZR4 365 aaPredicted RBP13.17□□□□□ -0.3
CCBE1-201ENST00000398179 B4E1Z4 1266 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 PFKFB2O60825 505 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 NSFP46459 744 aaKnown RBP13.17□□□□□ -0.3
CCBE1-201ENST00000398179 TFAMQ00059 246 aaKnown RBP13.17□□□□□ -0.3
CCBE1-201ENST00000398179 BMPR2Q13873 1038 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 KDM7AQ6ZMT4 941 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 ASB2Q96Q27 587 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 LY9Q9HBG7 655 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 MTMR10Q9NXD2 777 aa13.17□□□□□ -0.3
CCBE1-201ENST00000398179 MSH6P52701 1360 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 C12orf71A8MTZ7 269 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 DENRO43583 198 aaKnown RBP13.16□□□□□ -0.3
CCBE1-201ENST00000398179 IL18RAPO95256 599 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 TYK2P29597 1187 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 TRIM61Q5EBN2 209 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 FBXL13Q8NEE6 735 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 CDV3Q9UKY7 258 aaKnown RBP13.16□□□□□ -0.3
CCBE1-201ENST00000398179 MAPRE3Q9UPY8 281 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 PGRMC1O00264 195 aaKnown RBP13.16□□□□□ -0.3
CCBE1-201ENST00000398179 DEXIO95424 95 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 TGFBR2P37173 567 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 NT5C2P49902 561 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 ARPP19P56211 112 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 TDGQ13569 410 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 DOC2AQ14183 400 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 NFE2Q16621 373 aaPredicted RBP13.16□□□□□ -0.3
CCBE1-201ENST00000398179 SLC25A24Q6NUK1 477 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 RBM44Q6ZP01 1051 aaKnown RBP13.16□□□□□ -0.3
CCBE1-201ENST00000398179 DNAAF5Q86Y56 855 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
CCBE1-201ENST00000398179 RRM2P31350 389 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 TXKP42681 527 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 TPTEP56180 551 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 ERVK-8P63133 956 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 ARHGEF19Q8IW93 802 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 UBR7Q8N806 425 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 PMEPA1Q969W9 287 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 LRFN5Q96NI6 719 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 PKD2L1Q9P0L9 805 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 MYRFQ9Y2G1 1151 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 CFBP00751 764 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 PFKFB1P16118 471 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 ZNF14P17017 642 aaPredicted RBP13.16□□□□□ -0.3
CCBE1-201ENST00000398179 PSMA3P25788 255 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 ZAP70P43403 619 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
CCBE1-201ENST00000398179 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 TRIM65Q6PJ69 517 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 TATDN2Q93075 761 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 ZNF597Q96LX8 424 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 A0A0B4J203 849 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 SCGB2A1O75556 95 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 NPR3P17342 541 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 FIP1L1Q6UN15 594 aaKnown RBP13.16□□□□□ -0.3
CCBE1-201ENST00000398179 RAB43Q86YS6 212 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 MTURNQ8N3F0 131 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 KIF2BQ8N4N8 673 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 KIF21AQ7Z4S6 1674 aa13.16□□□□□ -0.3
CCBE1-201ENST00000398179 PDIA3P30101 505 aaKnown RBP13.15□□□□□ -0.3
CCBE1-201ENST00000398179 MECP2P51608 486 aaKnown RBP13.15□□□□□ -0.3
CCBE1-201ENST00000398179 AAGABQ6PD74 315 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 DCUN1D2Q6PH85 259 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 KBTBD2Q8IY47 623 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 BCL7CQ8WUZ0 217 aaPredicted RBP13.15□□□□□ -0.3
CCBE1-201ENST00000398179 ASB15Q8WXK1 588 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 RIBC2Q9H4K1 309 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 PCDHGB3Q9Y5G1 929 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 TTLL8A6PVC2 850 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 MEI4A8MW99 385 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 POC1B-GALNT4F8VUJ3 575 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 ZBTB11O95625 1053 aaPredicted RBP13.15□□□□□ -0.3
CCBE1-201ENST00000398179 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
CCBE1-201ENST00000398179 MAGEA4P43358 317 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 DPYSQ14117 519 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 RHEBQ15382 184 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 TMEM17Q86X19 198 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 CRLF3Q8IUI8 442 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 RSAD2Q8WXG1 361 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 HES6Q96HZ4 224 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 ENTPD7Q9NQZ7 604 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 MORF4L1Q9UBU8 362 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 NFU1Q9UMS0 254 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 CIB4A0PJX0 185 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 TRIM49D1C9J1S8 452 aa13.15□□□□□ -0.3
CCBE1-201ENST00000398179 ZBTB24O43167 697 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms