RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PM20D1Q6GTS8 502 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 TNS4Q8IZW8 715 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 ZBP1Q9H171 429 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 AMACRQ9UHK6 382 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 A0A087WUV0 522 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 YJEFN3A6XGL0 299 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 GRXCR1A8MXD5 290 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 E7ENQ6 273 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 SOAT2O75908 522 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 RNF8O76064 485 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 FGGP02679 453 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 MYOGP15173 224 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 EIF3BP55884 814 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 RWDD2BP57060 319 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 C15orf59Q2T9L4 293 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 CEP85LQ5SZL2 805 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 DCAF12L1Q5VU92 463 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 FAM109BQ6ICB4 259 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 HFE2Q6ZVN8 426 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 GPR65Q8IYL9 337 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 SCML4Q8N228 414 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 ARFGAP1Q8N6T3 406 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 IRGQQ8WZA9 623 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 DDX23Q9BUQ8 820 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 EPN3Q9H201 632 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 AFF4Q9UHB7 1163 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 GGA2Q9UJY4 613 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 RWDD3Q9Y3V2 267 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 NLRC5Q86WI3 1866 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 PSTPIP1O43586 416 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 LRCH4O75427 683 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 DAB1O75553 588 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 CTSAP10619 480 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 TCF4P15884 667 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 DESP17661 470 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 CCT5P48643 541 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 ATP11AP98196 1134 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 IFRD2Q12894 506 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 CDO1Q16878 200 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 SH3PXD2AQ5TCZ1 1133 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 DEFB106AQ8N104 65 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 NUP93Q8N1F7 819 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 ZNF461Q8TAF7 563 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 POPDC2Q9HBU9 364 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 SSX2IPQ9Y2D8 614 aa20.15■□□□□ 0.82
PDLIM2-204ENST00000397760 LILRB3O75022 631 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 ABLIM3O94929 683 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 CPP00450 1065 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 LSP1P33241 339 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 CA8P35219 290 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 GJC1P36383 396 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 MDH1P40925 334 aaKnown RBP20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 MATKP42679 507 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 ZNF211Q13398 564 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 UAP1Q16222 522 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 LRRC38Q5VT99 294 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 TPGS2Q68CL5 300 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 BHLHA9Q7RTU4 235 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 TMC3Q7Z5M5 1100 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 SH2D3CQ8N5H7 860 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 RUNDC3BQ96NL0 473 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 SLC2A13Q96QE2 648 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 C17orf80Q9BSJ5 609 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 PLVAPQ9BX97 442 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 FNIP2Q9P278 1114 aa20.14■□□□□ 0.81
PDLIM2-204ENST00000397760 LTFP02788 710 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 PTPN9P43378 593 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 RPL10AP62906 217 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 CREMQ03060 361 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 RAB33AQ14088 237 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 HADHQ16836 314 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 DCAF6Q58WW2 860 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 KCTD16Q68DU8 428 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 TMC7Q7Z402 723 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 STKLD1Q8NE28 680 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 GPR152Q8TDT2 470 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 FAM172AQ8WUF8 416 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 ALG13Q9NP73 1137 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 RASAL2Q9UJF2 1139 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 LZTS1Q9Y250 596 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 NDUFAB1O14561 156 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 CAPN9O14815 690 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 TTI1O43156 1089 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 DAPK3O43293 454 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 PPFIA2O75334 1257 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 ARHGEF15O94989 841 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 CXCL14O95715 111 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 ATF2P15336 505 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 MIPP30301 263 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 NOS2P35228 1153 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 PCK1P35558 622 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 TUFMP49411 452 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 DUPD1Q68J44 220 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 MICALCLQ6ZW33 695 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 SPATA17Q96L03 361 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 FAM129AQ9BZQ8 928 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 UBE2OQ9C0C9 1292 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms