RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 LVRNQ6Q4G3 990 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ENOSF1Q7L5Y1 443 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 NLRP9Q7RTR0 991 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 CLNKQ7Z7G1 428 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 UNC45BQ8IWX7 931 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 C12orf29Q8N999 325 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 KCTD6Q8NC69 237 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 EXD1Q8NHP7 514 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 CXorf38Q8TB03 319 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 PYROXD1Q8WU10 500 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 C10orf82Q8WW14 230 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 RSAD2Q8WXG1 361 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 NSL1Q96IY1 281 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 CPB2Q96IY4 423 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 PIWIL1Q96J94 861 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 SNX27Q96L92 541 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 TWNKQ96RR1 684 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 CPXM1Q96SM3 734 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 PCYT2Q99447 389 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 HNRNPABQ99729 332 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 MAGEB5Q9BZ81 275 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 MINDY3Q9H8M7 445 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 GPATCH2LQ9NWQ4 482 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 THEGQ9P2T0 379 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 DNAJB4Q9UDY4 337 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 IP6K2Q9UHH9 426 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 TDRKHQ9Y2W6 561 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 FADS3Q9Y5Q0 445 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ACTL7BQ9Y614 415 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ZNF646O15015 1829 aaPredicted RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 KANSL1LA0AUZ9 987 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 MATN2O00339 956 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 C2CD2LO14523 706 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 PSTPIP1O43586 416 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 EDF1O60869 148 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 ARIH2O95376 493 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 BAG2O95816 211 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ITGB3P05106 788 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 IQCF3P0C7M6 154 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 PIM1P11309 404 aaPredicted RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 GRIA2P42262 883 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 NAMPTP43490 491 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 RPL5P46777 297 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 ARFIP2P53365 341 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 EMP3P54852 163 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 IRX4P78413 519 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 HNRNPDQ14103 355 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 SPARCL1Q14515 664 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 C15orf59Q2T9L4 293 aaPredicted RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 C4orf46Q504U0 113 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 TFDP3Q5H9I0 405 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 CCDC62Q6P9F0 684 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 MTDHQ86UE4 582 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 RASSF3Q86WH2 238 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 RFX6Q8HWS3 928 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 FBXO16Q8IX29 292 aaPredicted RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 PALM2Q8IXS6 379 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 KATNAL2Q8IYT4 538 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 FBXO36Q8NEA4 188 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ZNF398Q8TD17 642 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 CASP10Q92851 521 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 HSPBAP1Q96EW2 488 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 CGRRF1Q99675 332 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 LPIN3Q9BQK8 851 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 EBF3Q9H4W6 596 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 DHX33Q9H6R0 707 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 C17orf75Q9HAS0 396 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 UBN1Q9NPG3 1134 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 AVENQ9NQS1 362 aaPredicted RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 TSC22D4Q9Y3Q8 395 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 HBS1LQ9Y450 684 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 SCINQ9Y6U3 715 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 WDR81Q562E7 1941 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 FER1L6Q2WGJ9 1857 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 E9PBE3 544 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 DNALI1O14645 258 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 VILLO15195 856 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 LRCH4O75427 683 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 FARP2O94887 1054 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 PRKCBP05771 671 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 KITP10721 976 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 BDNFP23560 247 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 PGM1P36871 562 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 TMED10P49755 219 aaKnown RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 CHN2P52757 468 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 SNRPFP62306 86 aaKnown RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 LAMTOR4Q0VGL1 99 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 TCEAL1Q15170 157 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 MAPK6Q16659 721 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 HIF1AQ16665 826 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 DUOXA2Q1HG44 320 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 PPP6R3Q5H9R7 873 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 MDH1BQ5I0G3 518 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 MAP3K21Q5TCX8 1036 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 KLHDC10Q6PID8 442 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 RGS9BPQ6ZS82 235 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 ZNF677Q86XU0 584 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 TREML1Q86YW5 311 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 CTAGE3PQ8IX95 158 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 BBS5Q8N3I7 341 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms