RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 SLC1A1P43005 524 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 PTPN9P43378 593 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 CLCN4P51793 760 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 IFRD2Q12894 506 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 MTMR3Q13615 1198 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 CCDC14Q49A88 953 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 DNTTIP2Q5QJE6 756 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 DAB2IPQ5VWQ8 1189 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 PAPD7Q5XG87 772 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 SCD5Q86SK9 330 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 DEFB106AQ8N104 65 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 ARFGAP1Q8N6T3 406 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 CFAP57Q96MR6 1250 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 CNPY3Q9BT09 278 aa17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 PHF7Q9BWX1 381 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-205ENST00000397406 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.71■□□□□ 0.433e-6■■■□□ 18.3
TSPAN4-205ENST00000397406 GLUD1P00367 558 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 C1RP00736 705 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 SPATA31D3P0C874 917 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 YWHAQP27348 245 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 SDC4P31431 198 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 PGFP49763 221 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 AMPD2Q01433 879 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 TWF1Q12792 350 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 ACAP1Q15027 740 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 C15orf59Q2T9L4 293 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 SPATA31D4Q6ZUB0 917 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 BEND5Q7L4P6 421 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 UBE2Q2Q8WVN8 375 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 ADAM33Q9BZ11 813 aa17.7■□□□□ 0.42
TSPAN4-205ENST00000397406 DDX3YO15523 660 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 SPOPO43791 374 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 HMGA1P17096 107 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 TFE3P19532 575 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 CTNNA1P35221 906 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 NOS2P35228 1153 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 ALDH1A3P47895 512 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 TAS2R40P59535 323 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 YWHAGP61981 247 aaKnown RBP eCLIP17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 SH3PXD2AQ5TCZ1 1133 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 OTUD1Q5VV17 481 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 SYPL2Q5VXT5 272 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 BSPRYQ5W0U4 402 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 CC2D1AQ6P1N0 951 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 MON1AQ86VX9 555 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 KREMEN2Q8NCW0 462 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 SLC7A14Q8TBB6 771 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 CENPIQ92674 756 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 NT5C3BQ969T7 300 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 NPY6RQ99463 290 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 NMUR1Q9HB89 426 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 NAALADL1Q9UQQ1 740 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 USTQ9Y2C2 406 aa17.69■□□□□ 0.42
TSPAN4-205ENST00000397406 MIF4GDA9UHW6 222 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 LRCH4O75427 683 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 CSH1P0DML2 217 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 CSH2P0DML3 217 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 ALADP13716 330 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 TCF4P15884 667 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 CTNNA2P26232 953 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 PITX1P78337 314 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 TAF10Q12962 218 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 RPS6KA1Q15418 735 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 SLC25A52Q3SY17 297 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 RAB6CQ53S08 254 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 DCAF6Q58WW2 860 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 CCDC149Q6ZUS6 474 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 BNIPLQ7Z465 357 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 KRT35Q92764 455 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 GOLGA1Q92805 767 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 CASP10Q92851 521 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 FBXO32Q969P5 355 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 RPGRIP1Q96KN7 1286 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 MYRFLQ96LU7 910 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 TRIM62Q9BVG3 475 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 RAB6CQ9H0N0 254 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 POMKQ9H5K3 350 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 OSER1Q9NX31 292 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 GMIPQ9P107 970 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 SNX12Q9UMY4 172 aa17.68■□□□□ 0.42
TSPAN4-205ENST00000397406 A0A1W2PQH9 124 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 RNF8O76064 485 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 C8AP07357 584 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 ZDHHC11BP0C7U3 371 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 NCAM1P13591 858 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 PRLRP16471 622 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 HOXB8P17481 243 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 MARCKSL1P49006 195 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 PEX5P50542 639 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 EPHB3P54753 998 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 ATP11AP98196 1134 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 PLD1Q13393 1074 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 VEPH1Q14D04 833 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 CDO1Q16878 200 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 ARHGAP18Q8N392 663 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 FAM172AQ8WUF8 416 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 EDEM1Q92611 657 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 TRMT2BQ96GJ1 504 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 TBCBQ99426 244 aa17.67■□□□□ 0.42
TSPAN4-205ENST00000397406 ADAM7Q9H2U9 754 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms