RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 KLF8O95600 359 aaPredicted RBP10.92□□□□□ -0.66
NEDD8-202ENST00000396828 FAM163BP0C2L3 166 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 CCDC130P13994 396 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 PFKLP17858 780 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 YWHAQP27348 245 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 CDC25BP30305 580 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 KIR2DL1P43626 348 aaPredicted RBP10.92□□□□□ -0.66
NEDD8-202ENST00000396828 PDE6CP51160 858 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 CLDN10P78369 228 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 KDSRQ06136 332 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 CCDC173Q0VFZ6 552 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 NR1I3Q14994 352 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 ST3GAL2Q16842 350 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 VWA3BQ502W6 1294 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 C1orf220Q5T0J3 134 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 PMS2CLQ68D20 193 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 SPOPLQ6IQ16 392 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 ACOT1Q86TX2 421 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 FAM35AQ86V20 835 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 BBS7Q8IWZ6 715 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 FUKQ8N0W3 1084 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 C12orf29Q8N999 325 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 OLIG1Q8TAK6 271 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 FBXO32Q969P5 355 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 EXOC4Q96A65 974 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 P2RY11Q96G91 374 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 SLITRK1Q96PX8 696 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 PNKPQ96T60 521 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 SMOQ99835 787 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 EDEM2Q9BV94 578 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 VRTNQ9H8Y1 702 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.92□□□□□ -0.66
NEDD8-202ENST00000396828 IL37Q9NZH6 218 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 GMIPQ9P107 970 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 MBD1Q9UIS9 605 aaPredicted RBP10.92□□□□□ -0.66
NEDD8-202ENST00000396828 TNRC6BQ9UPQ9 1833 aaKnown RBP10.92□□□□□ -0.66
NEDD8-202ENST00000396828 GON4LQ3T8J9 2241 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 A0A0A0MRY4 1105 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 LGALS16A8MUM7 142 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 GOLGA6L6A8MZA4 724 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 CDX4O14627 284 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-202ENST00000396828 STX10O60499 249 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 GREM1O60565 184 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 PHACTR2O75167 634 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 RHOBTB1O94844 696 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 TBX18O95935 607 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 TOP3BO95985 862 aaKnown RBP10.91□□□□□ -0.66
NEDD8-202ENST00000396828 ZDHHC11BP0C7U3 371 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 ATICP31939 592 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 PTGER3P43115 390 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 PPP3CCP48454 512 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 SLC5A3P53794 718 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 IRX4P78413 519 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 MRPS21P82921 87 aaKnown RBP10.91□□□□□ -0.66
NEDD8-202ENST00000396828 UBXN1Q04323 297 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 BIRC3Q13489 604 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 NCOA4Q13772 614 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 ELF2Q15723 593 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 ZNF699Q32M78 642 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 USP39Q53GS9 565 aaKnown RBP10.91□□□□□ -0.66
NEDD8-202ENST00000396828 DCAF17Q5H9S7 520 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-202ENST00000396828 TCERG1LQ5VWI1 586 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 SNX30Q5VWJ9 437 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 PSAPL1Q6NUJ1 521 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 ARMCX6Q7L4S7 300 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 APTXQ7Z2E3 356 aaKnown RBP10.91□□□□□ -0.66
NEDD8-202ENST00000396828 GPRIN1Q7Z2K8 1008 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 TMEM25Q86YD3 366 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 MIB1Q86YT6 1006 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 TRIM59Q8IWR1 403 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 ERLEC1Q96DZ1 483 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 NAP1L5Q96NT1 182 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-202ENST00000396828 TWNKQ96RR1 684 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 MED10Q9BTT4 135 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 NDST4Q9H3R1 872 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 RTN4Q9NQC3 1192 aaKnown RBP10.91□□□□□ -0.66
NEDD8-202ENST00000396828 ARHGEF4Q9NR80 690 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 TMEM74BQ9NUR3 256 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 OSER1Q9NX31 292 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 SSUH2Q9Y2M2 353 aa10.91□□□□□ -0.66
NEDD8-202ENST00000396828 DSPP15924 2871 aaKnown RBP10.91□□□□□ -0.66
NEDD8-202ENST00000396828 MYH10P35580 1976 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 IGF2RP11717 2491 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 FAM92AA1XBS5 289 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 IRF1P10914 325 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 ADH5P11766 374 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 DHPSP49366 369 aaPredicted RBP10.9□□□□□ -0.66
NEDD8-202ENST00000396828 VAMP7P51809 220 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 NDST1P52848 882 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 ENPEPQ07075 957 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 MAP7D1Q3KQU3 841 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 ZNF667Q5HYK9 610 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 HECTD3Q5T447 861 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 ETFBKMTQ8IXQ9 262 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 TMEFF1Q8IYR6 380 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 DEFB119Q8N690 84 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 SLC2A14Q8TDB8 520 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 DDX1Q92499 740 aaKnown RBP10.9□□□□□ -0.66
NEDD8-202ENST00000396828 FSCN3Q9NQT6 498 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms