RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 FAM78AQ5JUQ0 283 aa22.27■■□□□ 1.16
FXN-202ENST00000396364 MSANTD2Q6P1R3 559 aa22.27■■□□□ 1.16
FXN-202ENST00000396364 HFE2Q6ZVN8 426 aa22.27■■□□□ 1.16
FXN-202ENST00000396364 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.27■■□□□ 1.16
FXN-202ENST00000396364 ZSWIM3Q96MP5 696 aa22.27■■□□□ 1.16
FXN-202ENST00000396364 SERPINB11Q96P15 392 aa22.27■■□□□ 1.16
FXN-202ENST00000396364 SLC2A13Q96QE2 648 aa22.27■■□□□ 1.16
FXN-202ENST00000396364 METTL5Q9NRN9 209 aaKnown RBP22.27■■□□□ 1.16
FXN-202ENST00000396364 OSER1Q9NX31 292 aa22.27■■□□□ 1.16
FXN-202ENST00000396364 MARCH2Q9P0N8 246 aa22.27■■□□□ 1.16
FXN-202ENST00000396364 IGSF9Q9P2J2 1179 aa22.27■■□□□ 1.16
FXN-202ENST00000396364 RASAL2Q9UJF2 1139 aa22.27■■□□□ 1.16
FXN-202ENST00000396364 EPN1Q9Y6I3 576 aaPredicted RBP22.27■■□□□ 1.16
FXN-202ENST00000396364 XIRP2A4UGR9 3374 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 DOCK8Q8NF50 2099 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 HELZP42694 1942 aaKnown RBP22.26■■□□□ 1.15
FXN-202ENST00000396364 SIGLEC16A6NMB1 481 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 EIF3CLB5ME19 914 aaKnown RBP22.26■■□□□ 1.15
FXN-202ENST00000396364 GRAP2O75791 330 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 NDUFA10O95299 355 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 ABCB4P21439 1286 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 RRM1P23921 792 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 CCDC173Q0VFZ6 552 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 EFEMP1Q12805 493 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 ELSPBP1Q96BH3 223 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 CYP2S1Q96SQ9 504 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 EIF3CQ99613 913 aaKnown RBP22.26■■□□□ 1.15
FXN-202ENST00000396364 SPTLC3Q9NUV7 552 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 THG1LQ9NWX6 298 aaKnown RBP22.26■■□□□ 1.15
FXN-202ENST00000396364 INTUQ9ULD6 942 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 PAXBP1Q9Y5B6 917 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 CPQQ9Y646 472 aa22.26■■□□□ 1.15
FXN-202ENST00000396364 LOC730098B7Z3J9 87 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 ECI2O75521 394 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 LCA5LO95447 670 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 SDC4P31431 198 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 KRT83P78385 493 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 NNTQ13423 1086 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 TJAP1Q5JTD0 557 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 CC2D1AQ6P1N0 951 aaPredicted RBP22.25■■□□□ 1.15
FXN-202ENST00000396364 MIB1Q86YT6 1006 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 LRRC8AQ8IWT6 810 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 DEFB106AQ8N104 65 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 KIAA1958Q8N8K9 716 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 DEPDC1BQ8WUY9 529 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 PIWIL1Q96J94 861 aaKnown RBP22.25■■□□□ 1.15
FXN-202ENST00000396364 PDLIM2Q96JY6 352 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 RNF38Q9H0F5 515 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 SMOC2Q9H3U7 446 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 MYO1AQ9UBC5 1043 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 LSM7Q9UK45 103 aaKnown RBP22.25■■□□□ 1.15
FXN-202ENST00000396364 NAALADL1Q9UQQ1 740 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 SH3BP1Q9Y3L3 701 aa22.25■■□□□ 1.15
FXN-202ENST00000396364 HBS1LQ9Y450 684 aaKnown RBP22.25■■□□□ 1.15
FXN-202ENST00000396364 PRUNE2Q8WUY3 3088 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 SOWAHDA6NJG2 315 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 ARHGAP6O43182 974 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 F9P00740 461 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 TMEM253P0C7T8 217 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 BMP1P13497 986 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 TCF3P15923 654 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 MAGEA1P43355 309 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 PGFP49763 221 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 GALCP54803 685 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 ZP2Q05996 745 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 MTA1Q13330 715 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 PLEKHA7Q6IQ23 1121 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 SND1Q7KZF4 910 aaKnown RBP eCLIP22.24■■□□□ 1.15
FXN-202ENST00000396364 YAF2Q8IY57 180 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 SLC22A12Q96S37 553 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 DCLK3Q9C098 648 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 FAM204AQ9H8W3 233 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 LCMT1Q9UIC8 334 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 TMEM59LQ9UK28 342 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 NUDT5Q9UKK9 219 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 NENFQ9UMX5 172 aa22.24■■□□□ 1.15
FXN-202ENST00000396364 SLC12A8A0AV02 714 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 NRG2O14511 850 aaPredicted RBP22.23■■□□□ 1.15
FXN-202ENST00000396364 TBX18O95935 607 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 PDGFRAP16234 1089 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 TAF5Q15542 800 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 PHLDB2Q86SQ0 1253 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 BPIFB1Q8TDL5 484 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 DQX1Q8TE96 717 aaKnown RBP22.23■■□□□ 1.15
FXN-202ENST00000396364 USP13Q92995 863 aaPredicted RBP22.23■■□□□ 1.15
FXN-202ENST00000396364 PLD4Q96BZ4 506 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 MCEEQ96PE7 176 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 DDX23Q9BUQ8 820 aaKnown RBP22.23■■□□□ 1.15
FXN-202ENST00000396364 THAP2Q9H0W7 228 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 SMPD4Q9NXE4 827 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 ZNF510Q9Y2H8 683 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 COL6A3P12111 3177 aa22.23■■□□□ 1.15
FXN-202ENST00000396364 ANHXE9PGG2 379 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 SLC9A3R1O14745 358 aaPredicted RBP22.22■■□□□ 1.15
FXN-202ENST00000396364 TRUB2O95900 331 aaKnown RBP22.22■■□□□ 1.15
FXN-202ENST00000396364 FYNP06241 537 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 SLC2A3P11169 496 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 GPD1P21695 349 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 HARS2P49590 506 aaKnown RBP22.22■■□□□ 1.15
FXN-202ENST00000396364 MAMLD1Q13495 774 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms