RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 BRCA2P51587 3418 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 ZNF197O14709 1029 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 CAPN9O14815 690 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 MDM4O15151 490 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 ARHGEF15O94989 841 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 SEC24AO95486 1093 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 DNAJB1P25685 340 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 PTPN7P35236 360 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 RDXP35241 583 aaKnown RBP9.22□□□□□ -0.93
CCR9-203ENST00000395963 RFC1P35251 1148 aaPredicted RBP9.22□□□□□ -0.93
CCR9-203ENST00000395963 PBX2P40425 430 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 RING1Q06587 406 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 SCAPQ12770 1279 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 KCNC3Q14003 757 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 ERCC6LQ2NKX8 1250 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 LEKR1Q6ZMV7 388 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 MAIP1Q8WWC4 291 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 RXFP2Q8WXD0 754 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 CD101Q93033 1021 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 NAP1L3Q99457 506 aaPredicted RBP9.22□□□□□ -0.93
CCR9-203ENST00000395963 DONSONQ9NYP3 566 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 SALL4Q9UJQ4 1053 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 TTC7AQ9ULT0 858 aaPredicted RBP9.22□□□□□ -0.93
CCR9-203ENST00000395963 HBS1LQ9Y450 684 aaKnown RBP9.22□□□□□ -0.93
CCR9-203ENST00000395963 HYOU1Q9Y4L1 999 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 PCDHA3Q9Y5H8 950 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 ALG6Q9Y672 507 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 MYO16Q9Y6X6 1858 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 GOLGA8SH3BPF8 625 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 SPOPO43791 374 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 TCF3P15923 654 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 HMGA1P17096 107 aaKnown RBP9.22□□□□□ -0.93
CCR9-203ENST00000395963 RPL17P18621 184 aaKnown RBP9.22□□□□□ -0.93
CCR9-203ENST00000395963 TWF1Q12792 350 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 PPP2R5DQ14738 602 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 RPS6KA1Q15418 735 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 ARL13BQ3SXY8 428 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 BSPRYQ5W0U4 402 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 GPRIN1Q7Z2K8 1008 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 KATNAL2Q8IYT4 538 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 SLC35F6Q8N357 371 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 EFHBQ8N7U6 833 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 GPATCH11Q8N954 259 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 RNF139Q8WU17 664 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 ARNTL2Q8WYA1 636 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 AZIN2Q96A70 460 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 FAM149B1Q96BN6 582 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 RBM41Q96IZ5 413 aaKnown RBP9.22□□□□□ -0.93
CCR9-203ENST00000395963 CRISPLD1Q9H336 500 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 ZNF576Q9H609 170 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 TLE6Q9H808 572 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 MED4Q9NPJ6 270 aa9.22□□□□□ -0.93
CCR9-203ENST00000395963 RRP15Q9Y3B9 282 aaKnown RBP9.22□□□□□ -0.93
CCR9-203ENST00000395963 HIDE1A8MVS5 230 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 BUB1O43683 1085 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 OLFM2O95897 454 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 USP17L7P0C7H9 530 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 PTPN2P17706 415 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 ACTN2P35609 894 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 NRG1Q02297 640 aaPredicted RBP9.21□□□□□ -0.94
CCR9-203ENST00000395963 EIF4EBP2Q13542 120 aaPredicted RBP9.21□□□□□ -0.94
CCR9-203ENST00000395963 COL19A1Q14993 1142 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 PDK2Q15119 407 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 DDR2Q16832 855 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 CCDC142Q17RM4 750 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 DDX42Q86XP3 938 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCR9-203ENST00000395963 DEFB106AQ8N104 65 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 SLC7A14Q8TBB6 771 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 FAM71BQ8TC56 605 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 RPGRIP1Q96KN7 1286 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 PRKD2Q9BZL6 878 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 MAN1C1Q9NR34 630 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCR9-203ENST00000395963 TRIM10Q9UDY6 481 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 DUSP10Q9Y6W6 482 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 YJEFN3A6XGL0 299 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 EFCAB8A8MWE9 144 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 E7ENQ6 273 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 ATMINO43313 823 aaPredicted RBP9.21□□□□□ -0.94
CCR9-203ENST00000395963 COMTP21964 271 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 SSTR3P32745 418 aaPredicted RBP9.21□□□□□ -0.94
CCR9-203ENST00000395963 FLT3P36888 993 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 RWDD2BP57060 319 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 RPL7AP62424 266 aaKnown RBP9.21□□□□□ -0.94
CCR9-203ENST00000395963 MESDQ14696 234 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 PPP2R5EQ16537 467 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 CCDC14Q49A88 953 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 DNAJB7Q7Z6W7 309 aaPredicted RBP9.21□□□□□ -0.94
CCR9-203ENST00000395963 MAP7D3Q8IWC1 876 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 EXD1Q8NHP7 514 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 JOSD2Q8TAC2 188 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 PLD4Q96BZ4 506 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 FRMD8P1Q9BZ68 369 aaPredicted RBP9.21□□□□□ -0.94
CCR9-203ENST00000395963 ASAH2Q9NR71 780 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCR9-203ENST00000395963 SNX12Q9UMY4 172 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 TLR6Q9Y2C9 796 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 SLC27A5Q9Y2P5 690 aa9.21□□□□□ -0.94
CCR9-203ENST00000395963 MYH10P35580 1976 aa9.2□□□□□ -0.94
CCR9-203ENST00000395963 IRAK2O43187 625 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms